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Name : lysS (BAMF_0081) Accession : YP_003918677.1 Strain : Bacillus amyloliquefaciens DSM 7 Genome accession: NC_014551 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 89690 - 91189 bp Length : 1500 bp Strand : + Note : - DNA sequence : ATGAGTCAAGAAGAGCAAAATCATGAGGAATTGAACGACCAGCTGCAAGTCAGACGCGATAAAATGAACCAGCTGAGAGA AAACGGCATTGATCCTTTCGGCGAACGTTTCGAGAGAACACATCAATCTCAGCAGATCATTGACGCCTATCAGGAGCTTT CTAAAGAAGAACTTGAAGAAAAAGCGATCGAAGTTACCATTGCAGGCCGTATGATGACAAAGCGCGGAAAAGGAAAAGCC GGCTTTGCGCACCTGCAGGACTTAGAGGGCCAAATTCAAATCTACGTAAGAAAAGACAGTGTCGGCGAAGAACAATATGA AATCTTTAAATCTTCAGACCTCGGAGACGTTATCGGCATCACCGGGAAAGTTTTCAAAACAAACGTAGGCGAGCTGTCTG TCAAAGCGACATCTTTTGAACTGCTGACAAAAGCACTGCGTCCTCTTCCTGATAAATATCATGGATTAAAAGATGTAGAA CAGCGTTACCGTCAGCGCTACCTTGATCTCATCGTAAATCCTGACAGCAAACAAACGTTTATCACACGCAGCAAAATCAT CCAAGCGATGAGAAGATACTTAGATGACCATGGATACTTAGAAGTTGAAACACCTACGATGCACAGCATACCGGGAGGAG CGTCTGCACGCCCGTTCATCACGCATCATAATGCGCTCGATATGCCTCTTTATATGCGTATTGCGATTGAGCTGCATCTG AAACGCCTTATCGTCGGCGGATTAGAAAAAGTCTACGAAATCGGCCGCGTGTTCCGTAATGAAGGTGTTTCTACACGCCA CAATCCTGAATTCACGATGATTGAGCTGTATGAAGCGTACGCCGATTATAAGGATATTATGAGCCTGACGGAAAACCTCG TTGCACATATTGCGCAGGAAGTGCTGGGAAGCACCACAATCCAGTACGGCGAAGAGCAGATTGATCTGAAACCTGAATGG AAACGACTCCATATGGTAGATGCCGTCAAAGAAGCGACAGGCGTAGATTTCTGGAATGAGATGACTGTTGAAGAAGCGCG AAGCCATGCAAAAGAACATGGCATCGAGATCACAAACTCAATGACAGTGGGCCATATCATCAATGAATTCTTCGAACAAA AAATTGAAGAAACACTCATTCAGCCGACATTTATTTACGGACATCCTGTAGAGATTTCTCCTCTCGCTAAGAAAAATCCT GAGGACCCTCGTTTTACAGACCGTTTCGAGCTGTTTATCGTCGGCCGTGAGCACGCTAACGCGTTTACGGAGCTGAATGA CCCTATCGATCAGAGAGAACGCTTTGAAGCGCAATTGAAAGAAAGAGAAGAAGGAAACGATGAAGCGCATATGATGGATG AAGACTTCGTTGAAGCTCTTGAATACGGCATGCCGCCGACCGGAGGATTGGGTATCGGCATCGACCGCCTCGTCATGCTG TTAACAAATGCTCCGTCTATCAGAGACGTTTTATTATTCCCTCAAATGAGACATCGCTAA Protein sequence : MSQEEQNHEELNDQLQVRRDKMNQLRENGIDPFGERFERTHQSQQIIDAYQELSKEELEEKAIEVTIAGRMMTKRGKGKA GFAHLQDLEGQIQIYVRKDSVGEEQYEIFKSSDLGDVIGITGKVFKTNVGELSVKATSFELLTKALRPLPDKYHGLKDVE QRYRQRYLDLIVNPDSKQTFITRSKIIQAMRRYLDDHGYLEVETPTMHSIPGGASARPFITHHNALDMPLYMRIAIELHL KRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGSTTIQYGEEQIDLKPEW KRLHMVDAVKEATGVDFWNEMTVEEARSHAKEHGIEITNSMTVGHIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNP EDPRFTDRFELFIVGREHANAFTELNDPIDQRERFEAQLKEREEGNDEAHMMDEDFVEALEYGMPPTGGLGIGIDRLVML LTNAPSIRDVLLFPQMRHR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 7e-128 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003918677.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 4e-128 | 53 |
