|
Name : gbsA (BAMF_2872) Accession : YP_003921468.1 Strain : Bacillus amyloliquefaciens DSM 7 Genome accession: NC_014551 Putative virulence/resistance : Virulence Product : glycine betaine aldehyde dehydrogenase, NAD+-dependent Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.8 Position : 2927554 - 2929026 bp Length : 1473 bp Strand : - Note : - DNA sequence : ATGAGCAAAACGCTTTATATCGGCGGTGAATGGATCAGTGCAGAAAAAAAGCAGACCCGCCGTATCATCAATCCATTTAA TCAAGAAGAAATTGCAACGGTATGTGAAGGAGACCGGGACGATGCGGTGAAAGCCATCGCCGCAGCCAGAAAAGCATTTG ATGAAGGGGAGTGGCCGGTGCTTTCCGGGCTGGAACGCGGCCAGTTTGTTCTGAAAATTGCGGAATTAATCAGACGTGAT CTGAACGAATTAGCTGAGCTGGAATCGCTTGATACAGGAAAAACAATCGAAGAAAGCAAAGCTGATATGGATGATATCGC AAATGTATTTCAGTATTATGCCGGTTTGGCGGATAAAGACGGGGGCGAGGTCATCTCATCTCCGATTCCTGATTCCGTAA GTAAAATCGTCAGAGAGCCCATCGGCGTGTGCGGACAAATTACGCCGTGGAACTATCCGCTCCTTCAGGCGAGCTGGAAA ATCGCTCCTGCTCTTGCGGCCGGTAATACGATCGTTTTAAAGCCGAGCGAGATTACTCCGCTGACAACCATTAAAGTCTT TCAATTAATAGAAGAAGCCGGTATTCCAAAGGGAGCCGCCAATCTTGTGCTTGGACCGGGCGCCTCTGTCGGTGACGAGC TGGCGAGAAACCTAGACGTCGATTTGGTGTCCTTTACGGGCGGAATTGAAACAGGCAAAAAAATTATGCAGGCGGCAAGC GGCAACGTGAAAAAGATTGCTCTGGAGCTTGGCGGCAAGAATCCGAATATCGTGTTCCAAGACGCTGATCTTGAAACAGC TGCAGATCAAGCGCTGAACGCCGTGTTTTTCCATGCCGGCCAAGTTTGTTCGGCAGGCTCCCGGCTTTTAGTGGATGAAG CGATTCATGATGAATTTTTAGCCGAGCTGATCAAGCGTACGAAACGCATCAAATTAGGAAACGGTTTTCATGAAGATACG GAAAGCGGTCCGCTGATTTCCGCCGAGCATCGGGCCAAAGTTGAAAAATACGTAGAAATCGGAATCGAAGAAGGGGCAAA GCTGGAAACAGGCGGCAAACGTCCTGATGATCCCGCCCTTCAGAACGGTTTCTTCTATGAACCTACTATTTTTTCAAACT GCAAGTCTGATATGCGGATTGTCCAAGAGGAGATCTTCGGTCCCGTTTTAACAGTCGAGTCATTTTCTTCTGAAGAAGAG GTGATCAGACTGGCCAACGATACCATTTACGGGCTGGCCGGGGCGGTATGGTCAAAGGATATTGAAAAATGCGAACGAGT AGCTCAAAAACTGCGGATGGGAACGGTATGGATCAATGATTTCCACCCGTATTTCGCGCAAGCGCCGTGGGGCGGGTACA AACAATCGGGCTTCGGCCGCGAACTCGGCAAAATCGGCCTGGAAGAATACACGGAAGTCAAACATATTTACCGCAACACA AAACCTGCAGCGGTTAACTGGTTTAAAGCATAA Protein sequence : MSKTLYIGGEWISAEKKQTRRIINPFNQEEIATVCEGDRDDAVKAIAAARKAFDEGEWPVLSGLERGQFVLKIAELIRRD LNELAELESLDTGKTIEESKADMDDIANVFQYYAGLADKDGGEVISSPIPDSVSKIVREPIGVCGQITPWNYPLLQASWK IAPALAAGNTIVLKPSEITPLTTIKVFQLIEEAGIPKGAANLVLGPGASVGDELARNLDVDLVSFTGGIETGKKIMQAAS GNVKKIALELGGKNPNIVFQDADLETAADQALNAVFFHAGQVCSAGSRLLVDEAIHDEFLAELIKRTKRIKLGNGFHEDT ESGPLISAEHRAKVEKYVEIGIEEGAKLETGGKRPDDPALQNGFFYEPTIFSNCKSDMRIVQEEIFGPVLTVESFSSEEE VIRLANDTIYGLAGAVWSKDIEKCERVAQKLRMGTVWINDFHPYFAQAPWGGYKQSGFGRELGKIGLEEYTEVKHIYRNT KPAAVNWFKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-75 | 42 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 1e-75 | 42 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 1e-75 | 42 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 1e-75 | 42 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 3e-70 | 42 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 2e-75 | 42 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 6e-70 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gbsA | YP_003921468.1 | glycine betaine aldehyde dehydrogenase, NAD+-dependent | VFG0082 | Protein | 5e-76 | 42 |
