Gene Information

Name : ripX (BAMF_2246)
Accession : YP_003920842.1
Strain : Bacillus amyloliquefaciens DSM 7
Genome accession: NC_014551
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2317319 - 2318209 bp
Length : 891 bp
Strand : -
Note : -

DNA sequence :
GTGAAGGATCAAATTAAGGATTTCATCCATTATGTGAGGGTTGAAAGAGGGCTGTCCCAAAATACGATGATGTCCTATGA
GCGTGATCTGAAAAGTTATTCTCTCTTCTTAACTGAAACCCTTCAGATCACTTCATGGAATGATGTGACCCGTCTTCATA
TTATTCAATATTTAAAGCATTTAAAGGACTCCGGAAAATCCGGTAAGACGTCTGCCAGACATTTGGCGTCGATCCGGTCT
TTTCATCAGTTTCTGTTAAGGGAAAAAGCCGCGGATAAAGATCCTTCGGTACATATTGAAACACAAAAAACAGAGCGGGC
GCTTCCAAAAGTGCTGGCGCTGCAAGAAGTAGAGCGGTTATTGGACACGCCTAAGCTTGACAGTCCGTTCGGTCTCAGGG
ATAAAGCCATGCTTGAACTGCTGTATGCAACGGGTATCAGGGTCAGCGAGATGATCGAGCTGAAATTATCTGATGTCCAT
TTGACGATGGGATTTGTCCGCTGCTTCGGAAAAGGGCGGAAAGAGCGGATTGTGCCCATCGGTGAAGCCGCCTCCCATGC
GATCGAAGCGTACATTGAAAAAGCCAGAGGGAAATTATTAAAGAAAAACGTGACCGAAGCACTTTTTCTGAATCATCACG
GCCGCCAGATCAGCCGGCAGGGATTCTGGAAAAACCTGAAAAAAATCGCACTTGAGGCGGGCATTAAAAAAGAACTGACA
CCGCACACGCTCCGGCACTCTTTTGCAACGCACCTGCTTGAAAACGGGGCGGACCTGCGCGCCGTACAGGAGATGCTCGG
ACATGCCGATATTTCCACGACGCAAATTTACACGCATGTGTCGAAAACAAGGCTGAAGGACGTGTACAAGCAGTATCATC
CGCGCGCTTAG

Protein sequence :
MKDQIKDFIHYVRVERGLSQNTMMSYERDLKSYSLFLTETLQITSWNDVTRLHIIQYLKHLKDSGKSGKTSARHLASIRS
FHQFLLREKAADKDPSVHIETQKTERALPKVLALQEVERLLDTPKLDSPFGLRDKAMLELLYATGIRVSEMIELKLSDVH
LTMGFVRCFGKGRKERIVPIGEAASHAIEAYIEKARGKLLKKNVTEALFLNHHGRQISRQGFWKNLKKIALEAGIKKELT
PHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTHVSKTRLKDVYKQYHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-55 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-55 44