Gene Information

Name : dhaS (BAMF_2002)
Accession : YP_003920598.1
Strain : Bacillus amyloliquefaciens DSM 7
Genome accession: NC_014551
Putative virulence/resistance : Virulence
Product : DhaS protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2101669 - 2103156 bp
Length : 1488 bp
Strand : +
Note : 'intermediary metabolism; Metabolism of coenzymes and prosthetic groups'

DNA sequence :
ATGAGTTCTTTAACGATGCAGATCACAAAAAGGCTGGAAACATTTTTACAGGGCACGAAGAAGCTTTATATTGACGGAAA
ATTTGTTCCGAGCGCTTCAGGAGCAACATTTGTCACGCCAAATCCGGCAACCGGAGAAACTTTGATGACGCTTTACGAGG
CACAGGCTGAAGACATTGACAGCGCAGTGAAAGCGGCACGCAAAGCCTTTGATCACGGCGAATGGCGCACTATGCCGGCC
GCTTCCAGAAGCAGGCTGATGTATAAGCTTGCCGATTTAATGGAAGAGCACAAAACTGAACTCGCGCAGCTTGAAACACT
TGATAACGGAAAACCGATTAATGAAACAACGAATGGAGATATCCCGCTGGCAATCGAGCATATGCGTTATTATGCCGGGT
GGTCCACAAAAATAACCGGACAAACGATTCCGGTCGCCGGCTCATATTTTAATTACACCCGCCATGAGCCTGTCGGCGTC
GTGGGGCAAATCATCCCTTGGAACTTCCCGCTCCTTATGGCGATGTGGAAAATGGGCGCCGCCCTTGCCACAGGCTGCAC
AATCGTTTTGAAACCGGCAGAGCAGACACCCCTGACCGCCCTCTATTTAGCGGAATTAATAGATCAGGCGGGCTTCCCTG
ACGGCGTCATCAATATTGTTCCTGGGTTCGGCGAGACAGCCGGGGAAGCGCTGACCAACCATGACGATGTTGATAAACTT
GCTTTTACCGGTTCTACAGAAATCGGCAAAAAGATCATGGAGAAAGCCGCGAAAAATATTAAGCGCGTAACACTGGAGCT
TGGCGGTAAGTCACCTAACATCATTTTACCTGACGCCAATTTGAAAAAAGCCATTCCCGGCGCTTTAAACGGGGTTATGT
TTAATCAGGGGCAGGTATGCTGTGCAGGCTCCCGTGTCTTCATTCACAAAGACAAATATGATGAAGTCGTAAGCGAAATG
GTTTCATATGCGAAATCACTTCGGCAAGGAGCCGGCCTTCATCAGGATACCCAAATCGGGCCGCTCGTCAGCCAGGAACA
GCATGAGCGCGTGCTTTCTTATATTGAAAAAGGAAAAACGGAAGGCGCCAAAGCTGTCACAGGCGGAAGCTGCCCGTTTG
AAGAAGGGTATTTTGTCTCCCCGACCGTATTTGCGGATGTGGATGACAGCATGACCATCGCAACAGAAGAAATTTTCGGC
CCGGTTTTAGCCGCCATTCCGTATGATACGGTTGATGAAGTTATTGAGCGGGCGAACCGCTCGGAATACGGCCTTGCAGC
CGGACTATGGACCGAGAATGTGAAAAACGCCCATTACATTGCTGACCGTCTACAGGCCGGCACCGTTTGGGTCAACTGCT
ACAATGTTTTTGATGCGGCGTCACCTTTCGGCGGCTATAAGCAATCCGGCCTCGGACGGGAAATGGGCTCTTATGCGCTG
GATAATTATACAGAAGTGAAAAGCGTCTGGATCAGTCTGGAAGATTGA

Protein sequence :
MSSLTMQITKRLETFLQGTKKLYIDGKFVPSASGATFVTPNPATGETLMTLYEAQAEDIDSAVKAARKAFDHGEWRTMPA
ASRSRLMYKLADLMEEHKTELAQLETLDNGKPINETTNGDIPLAIEHMRYYAGWSTKITGQTIPVAGSYFNYTRHEPVGV
VGQIIPWNFPLLMAMWKMGAALATGCTIVLKPAEQTPLTALYLAELIDQAGFPDGVINIVPGFGETAGEALTNHDDVDKL
AFTGSTEIGKKIMEKAAKNIKRVTLELGGKSPNIILPDANLKKAIPGALNGVMFNQGQVCCAGSRVFIHKDKYDEVVSEM
VSYAKSLRQGAGLHQDTQIGPLVSQEQHERVLSYIEKGKTEGAKAVTGGSCPFEEGYFVSPTVFADVDDSMTIATEEIFG
PVLAAIPYDTVDEVIERANRSEYGLAAGLWTENVKNAHYIADRLQAGTVWVNCYNVFDAASPFGGYKQSGLGREMGSYAL
DNYTEVKSVWISLED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-94 48
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-91 45
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-93 45
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-93 45
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-93 45
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-92 45
hpaE AAO17179.1 HpaE Not tested tcd island Protein 3e-78 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
dhaS YP_003920598.1 DhaS protein VFG0082 Protein 8e-92 45