Gene Information

Name : pdxS (BAMF_0011)
Accession : YP_003918607.1
Strain : Bacillus amyloliquefaciens DSM 7
Genome accession: NC_014551
Putative virulence/resistance : Unknown
Product : pyridoxine biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : 1.1.1.262
Position : 19026 - 19910 bp
Length : 885 bp
Strand : +
Note : Pyridoxal biosynthesis lyase pdxS;, Vitamin B6 biosynthesis protein, SOR/SNZ family, TIGR00343: pyridoxine biosynthesis protein

DNA sequence : 
ATGGCTCAAACAGGTACTGACCGTGTAAAACGCGGAATGGCGGAAATGCAAAAAGGCGGCGTCATCATGGACGTTGTAAA
TGCTGAACAAGCGAAGATTGCCGAAGAGGCGGGAGCTGTTGCCGTAATGGCGTTAGAACGTGTTCCGGCTGATATTCGCG
CTGCCGGCGGTGTTGCCCGCATGGCTGACCCGACGATCGTTGAAGAAGTAATGAATGCTGTATCCATTCCCGTAATGGCA
AAAGCGCGTATCGGACATATCGTTGAAGCGCGTGTCCTTGAAGCAATGGGAGTAGATTATATCGATGAAAGTGAAGTCCT
GACTCCTGCTGACGAAGAATTTCATTTAAATAAAAATGAATATACTGTTCCGTTCGTATGTGGATGCCGTGATCTTGGCG
AAGCAACGCGCCGTATCGCTGAAGGAGCGTCCATGCTTCGTACAAAAGGCGAACCGGGAACAGGAAACATTGTGGAAGCT
GTCCGCCATATGAGAAAAGTAAACGCGCAAGTGCGCAAAGTTGTGGCGATGAGCAATGATGAGCTGATGACTGAAGCTAA
AAACCTCGGTGCTCCTTATGAACTGCTTCTTCAAATTAAGCGTGACGGCAAATTGCCTGTTGTCAACTTTGCTGCCGGCG
GAGTGGCGACGCCTGCTGATGCGGCATTGATGATGCAGCTTGGCGCTGATGGCGTATTTGTCGGTTCAGGTATTTTCAAA
TCGGACAATCCTGCTAAATTCGCTAAAGCAATTGTTGAAGCAACGACTCACTACACAGATTACAAACTGATTGCTGAGCT
TTCTAAAGAATTGGGCACAGCAATGAAAGGAATCGAAATCTCAAATCTATTGCCGGAACAGCGTATGCAAGAACGCGGCT
GGTAA

Protein sequence : 
MAQTGTDRVKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMA
KARIGHIVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEA
VRHMRKVNAQVRKVVAMSNDELMTEAKNLGAPYELLLQIKRDGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFK
SDNPAKFAKAIVEATTHYTDYKLIAELSKELGTAMKGIEISNLLPEQRMQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 8e-83 64
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-82 63
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-82 63