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Name : gabD (AARI_07830) Accession : YP_003915975.1 Strain : Arthrobacter arilaitensis Re117 Genome accession: NC_014550 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 873967 - 875454 bp Length : 1488 bp Strand : + Note : succinate-semialdehyde dehydrogenase (NAD(P)(+)) reduces succinate semialdehyde into succinate. Involved in the degradation of gamma-aminobutyrate DNA sequence : ATGTCGATTACGGCCCAGCGCGAAGCAGAGTTGCTTGCCAAGGTACCAACCGGCCTTTTGATTAATGGCGAATGGCGAGA TGCCTCGGATGGCGGCACCTTCGACGTGCTTGATCCGGCGACCGGAGAAAAGCTGCTGACCCTGGCCAGCGCGACCAGCG AAGACGCCATGGCGGCCCTGGATGCCGCTGACGCAGTTCAGGCCGAATGGGCGCTGACCGCGCCACGCGAACGCGCCGAG ATCCTGCGCCGCGCCTTTGACCTGGTGACCGCGCGCAAAGACGACTTCGCGCTGCTGATGAGCCTTGAAATGGGCAAGCC GCTGGCCGAGGCTTACGGCGAAGTGACCTACGGTGCTGAATTCCTGCGCTGGTTCTCCGAAGAGACCGTGCGCCACTACG GCCGCTACGTCACCACCCCAGAGGGCAAGAACAAGGTGCTGGTGCACCACAAGCCAGTTGGCCCATGCCTGCTGATTACC CCGTGGAACTTCCCACTGGCCATGGCCACCCGCAAGGTCGGCCCGGCCATTGCCGCCGGTTGCACCATGGTGCTCAAGCC TGCCAAGCTGACCCCGCTGACCTCGCAGCTGTTTGCGGCCACCATGATGGAAGCCGGCCTGCCAGCTGGCGTGCTGAACG TGGTCTCCGGTTCTTCGGCTTCGAAGATCTCCGGCCCGCTGATGGCCGATGACCGCCTGCGCAAGGTTTCCTTCACCGGC TCCACCCCAGTGGGCAAGCAGCTCATGAAGGATGCCGCGGACAAGGTTCTGCGTACCTCGATGGAACTGGGCGGCAACGC ACCATTCCTCGTGTTCGAGGATGCTGACCTGGATGCAGCTGTTGAAGGCGCCATGGCTGCCAAGATGCGCAACATGGGCG AGGCCTGCACTGCAGCGAACCGCTTCCTGGTCCACGAGGACGTAGCCGAAGAATTCACCGCGAAGTTCGCATCGGCCATG AAGGCCCTGAAGCCAGGACGCGGTACCGACCCGGATACCACCGTTGGCCCATTGGTCGAGGAAAAGGCCCGCGACGAAGT CCACGCACTGGTCGAGGCCGCTGTCGCAGCCGGCGCAACTGCCGTCACCGGTGGTGCGCCAGTAGACGGACCAGGCTACT TCTACCAGCCAACCGTGCTGGCCAACGTGGCCAACGACGCGACGATCCTGACCCAGGAAATCTTCGGCCCAGTGGCACCG GTGACCACCTTCAAGAACGAGGCCGAAGCCATCAAGCTGGCTAACGCCAGCGAATACGGCCTGGCGTCCTACATCTACTC GCAGGACTTCAACCGCATGTTCCGCGTTTCGGAGCAGATCGAATTCGGTCTGGTCGGCTTCAACGCTGGCGTCATCTCCA ACGCCGCGGCACCATTCGGTGGCGTGAAGCAGTCGGGTCTGGGCCGTGAAGGCGGCGCAGAAGGCCTGGCAGAGTACACC ACGGTGCAGTACATCGGCATCGCCGATCCATACGCAGCCAAGAAGTAA Protein sequence : MSITAQREAELLAKVPTGLLINGEWRDASDGGTFDVLDPATGEKLLTLASATSEDAMAALDAADAVQAEWALTAPRERAE ILRRAFDLVTARKDDFALLMSLEMGKPLAEAYGEVTYGAEFLRWFSEETVRHYGRYVTTPEGKNKVLVHHKPVGPCLLIT PWNFPLAMATRKVGPAIAAGCTMVLKPAKLTPLTSQLFAATMMEAGLPAGVLNVVSGSSASKISGPLMADDRLRKVSFTG STPVGKQLMKDAADKVLRTSMELGGNAPFLVFEDADLDAAVEGAMAAKMRNMGEACTAANRFLVHEDVAEEFTAKFASAM KALKPGRGTDPDTTVGPLVEEKARDEVHALVEAAVAAGATAVTGGAPVDGPGYFYQPTVLANVANDATILTQEIFGPVAP VTTFKNEAEAIKLANASEYGLASYIYSQDFNRMFRVSEQIEFGLVGFNAGVISNAAAPFGGVKQSGLGREGGAEGLAEYT TVQYIGIADPYAAKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-93 | 48 |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-91 | 47 |
