|
Name : AARI_03960 (AARI_03960) Accession : YP_003915603.1 Strain : Arthrobacter arilaitensis Re117 Genome accession: NC_014550 Putative virulence/resistance : Virulence Product : iron-siderophore ABC transporter substrate-binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0609 EC number : - Position : 429705 - 430670 bp Length : 966 bp Strand : - Note : TCDB: ATP-binding cassette (ABC) superfamily, iron chelate uptake transporter (FeCT) family (TC 3.A.1.14.z). ABCISSE: ABC transporter, binding protein (BP), ISVH- family (iron siderophores, vitamin B12 and hemin) DNA sequence : GTGCTGCTCGCGTTGCTTGTGGTGGTTCTGGCAGCAAGCCTGTCATTCGGCGCGAACCCGTTACCCATCAGCGAGATCTG GCGGGTCGTACTCTCCCCAGATAGCTCCGAGGCAAGCTCCATTGTCTGGACATTACGAGTACCTCGCACGGTTGTGGGGA TTGCTGCTGGTGTGGCATTCGGTGTTTCGGGCGCGCTCATCCAGGCGATCACACGCAACCCGCTTGCCGATCCCGGTATT CTCGGCGTAAATGCCGGAGCGGGGTTCGCCATTGTCGTTGGCGTGACGTTGTTCGGAGTCGGAGGAATCACCGGGTACAT CTGGTTTTCGTTCATCGGTGCGATCCTTGCCACGGTGCTCGTCTACCTGATCGGGTCAGCGGGACGAGGCGCCTCATCTC CCGTCACACTCGTGCTCGCAGGCATCGCACTTGCCGCTGTCCTCTCAGCTTTCTCAACGTTTCTGACACTGATGGATCAG GAGACGTTCCGTTCCTTCCGGGCTTGGGGGTTGGGTTCCCTCTCGCGCGCCTCACTCGATGACACCGCTTCGGTTGCCCC GTTTCTGGCGGTAGGAATCCTGTTAGCCGCACTGATCAGCAGCTCCTTGAACGCGGTCGCGCTGGGAGACGACCAAGCGA CCGCACTCGGAGCAAGCGTCACCCGCACTCGTATTTTGGGGATCATTGCCGTGACGCTCCTCGCAGGTGGCGGAACAGCG CTCACCGGAGGTATCGCGTTCGTAGGTCTCATGGTCCCGCACATCGTGCGCTGGTTCACCGGACCCGACCAGCGATGGAT CATCGCCTACACCGCCCTCGCGGCACCCTCCATCGTGCTCATCGCAGACGTGCTGGGACGAGTGATCACCCGCCCCGGCG AGATCGAGGCCGGCGTGCTCACCGCACTCATCGGTGCCCCCGTCCTCATCGCACTTGTGCGCCGGCGAAAGGCATCCGGG CTATGA Protein sequence : MLLALLVVVLAASLSFGANPLPISEIWRVVLSPDSSEASSIVWTLRVPRTVVGIAAGVAFGVSGALIQAITRNPLADPGI LGVNAGAGFAIVVGVTLFGVGGITGYIWFSFIGAILATVLVYLIGSAGRGASSPVTLVLAGIALAAVLSAFSTFLTLMDQ ETFRSFRAWGLGSLSRASLDDTASVAPFLAVGILLAALISSSLNAVALGDDQATALGASVTRTRILGIIAVTLLAGGGTA LTGGIAFVGLMVPHIVRWFTGPDQRWIIAYTALAAPSIVLIADVLGRVITRPGEIEAGVLTALIGAPVLIALVRRRKASG L |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fagA | YP_005680309.1 | hypothetical protein | Not tested | PiCp 1 | Protein | 1e-25 | 44 |
| fagA | YP_005682399.1 | hypothetical protein | Virulence | PiCp 1 | Protein | 1e-25 | 44 |
| fagA | YP_003782432.1 | integral membrane protein | Virulence | PiCp 1 | Protein | 1e-25 | 44 |
| fagA | YP_005684490.1 | hypothetical protein | Not tested | PiCp 1 | Protein | 1e-25 | 44 |
| SP_1033 | NP_345508.1 | iron ABC transporter permease | Virulence | PPI-1 | Protein | 9e-33 | 42 |
| SPN23F_09540 | YP_002510937.1 | ferric siderophore ABC transporter permease | Virulence | PPI-1 | Protein | 9e-33 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| AARI_03960 | YP_003915603.1 | iron-siderophore ABC transporter substrate-binding protein | VFG0926 | Protein | 3e-32 | 47 |
