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Name : clpC (AARI_03410) Accession : YP_003915546.1 Strain : Arthrobacter arilaitensis Re117 Genome accession: NC_014550 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 365165 - 367723 bp Length : 2559 bp Strand : - Note : ATP-dependent Clp proteases act as chaperones to target the proteases to substrates DNA sequence : TTGCCAGCATTTTTCGGCGCACCGTCAGATGGCTCGTTCGAGGAATTCCTCTCTCGGTTCCTCTCTGCTCGGGCCCAGGC AGCACGTCCCATCGACATTACCCGCCTGCTTTCGGCTCGAACCCACGAAGCCGTAGCCACCGCGGCCGCAATCTCCCATG AGCACGGCCATGACGAGATTGATTCCCTGCACCTACTCATGGCACTGTTGCGCACCGAACCAATCGGCGAACACCTCGGT GCCATGGGCGTGGACATCGATGCTCTAGGTGCAGACGCCATCGCTCGCATGCCCAAGTCCCAGGAAAAGGCAGAGAAGCC AACCCGCCTTTCCTCTTCTGCCCAGCGCAGCCTCTTCGACGCATACCAAGTGGCACGAAACTATGGCTCGACCTATATCG ACCCGGATCACCTCTTCCTTGCGTTTGTCTTCAACCCGGAGTCGCCGGTCAGCCAGTTGCTCGCGCAACACGGTATTACC GGCCAGTCCCTGCAGCAAGCTGCCATGGAGCAGGCTCAGCGGGCCCAAAATGGCGGGCAGGAACAGGGCTCGGAGGAGTC AGATGTTTCCATGCTCGAACGCTACGGAACTGATTTGACCGCGCTTGCCGCTGATGGGCAGATCGATCCGGTCATCGGCC GTGACGACGAGCTGGACCAGGTTGTCGAAATCCTGGCCCGCCGCACCAAGAACAATCCGGTACTGATCGGCGAGGCCGGC GTAGGCAAGACAGCCATCGCCGAAGGCCTGGCCCGCGCCATCGTGGATGACCAGGTCCCGGAACAGATCCGCGGATCCCG CCTGATCTCCATCGACCTCCCGGGCATGCTGGCCGGAACGCGCTACCGCGGTGACTTTGAACAGCGCCTGACCGGGCTGC TGGAGGAAATCGCAGACGCAGAGGGCCAAGTCCTGGTGTTCATCGACGAAATGCACCTGCTGGTTGGCGCCGGCTCCGGA GAATCCGGAAATATGGATGCCGCTAACATCCTCAAGCCGCGCTTGGCTCGTGGAGAGCTGCACCTGATCGGCGCCACCAC GCTGGATGAATTCCGCAAGGTGGAGAAGGACAGCGCTCTGGCCCGCCGCTTCGGCAAGGTCACCGTTGCCGAACCGTCCG AGGAAGTCAGCTTGGCCATCTTGGAAGGCCTGCGTGAATCCTACGAAGACCACCACCAGGTGCAGTACACCCCTGCGGCT CTGAAGGCCGCGGTGGCACTCTCGGCCCGATACCTCACCGACCGTCAGCTGCCCGACAAGGCGATCGACCTGATCGACAT TGCTGGTGCACGGCGCTCGATTGCCGCTGGCGATACCGAAGACGTGCAGTCCCTGCGTGCGGAGCTGGTGGATGCTGAAC GCGAGAAGTCCCGGGCCATCGGGGAAGAACGCTATGAGGATGCCAGCGCCTGGCGCGACCACATCACCGAGCTGACTGCC CGGATCACGGCCGCCGAGGAAGCCGGCGACGCGGGAATCACCCGCGTGGTGGATGAAGCCCAGATCTCCGAGGTCATCTC CCGCTCCACCGGCATCCCGACCTCGCGGATCACCGGAGATGACAAGACCCGGCTGGCTTCGCTGGAAGAGTCCTTGCATG CCTCGGTGATCGGCCAGAAGGACGCGGTGTCTGCCGTGGCCCGCGCGGTACGCCGCAACCGCACCGGCATGTCCCCTGCC GGCCGCCCGATCGGCTCGTTCCTCTTCCTGGGTCCTACCGGTGTCGGCAAGACCGAGCTGGCCAAGGCCCTGGCCACCAA CCTGTTCGGTTCAGCCGACTCGCTGCTTCGCGTCGACATGAGCGAATACGGAGAAAAGCACACGGTCGCACGCCTGATCG GTGCCCCTCCGGGATACATCGGCCACGATGAGCCCGGCCAGCTGACCGAGAAGGTTCGCCGCAACCCGTACTCGGTGATC CTGCTTGATGAAATCGAGAAGGCGCACCCGGATGTCTTCAACGTGCTGCTGCAGGTACTCGATGACGGCCGGTTGACCGA CTCGGCCGGACGCACCGTGGACTTCTCCAACACGCTGATTCTGATGACCAGCAACCTCGGCGGCGAATATTTGGCGAATA AGGCCGGAAACTTCGGTTTCACCTCCACCAACGCCACCAGCGAGGCCCACGAGGTCCGCGCCAAGGTCATGGGCAAGGTA CGCGAGTTCATGCGTCCCGAGTTCCTGAACCGTTTGGATGAGGTACTGCTCTTCTCCAAGCTCTCGCAGTCCGAGATTAG CCAGATCGTCAAATTGGTCATCGCTGAAACCGAGGCCCGGTTGAATGATCAGGAACTGCAGCTGGAAATCAGCGACGCTG CCGTGCAGTTCCTGGCCAGCGAAGGATACGATCCCGAGTTCGGTGCCCGCCCGCTGCGCCGTTTGGTGCAGCGCAAGGTG CAAGATGCCATCGCCGATCTGCTGATCGATGATTCGCTGGCTGCCGGCGACACCGTTTTGGTGGACTACGCCGCTAACAA GCTGAGCGTGCAGAAGAAGGCCGAAATGCCGACTCCGCCTGCGCACAGCGAGCAGGTGCCGAGCTACTTCGGCAACTGA Protein sequence : MPAFFGAPSDGSFEEFLSRFLSARAQAARPIDITRLLSARTHEAVATAAAISHEHGHDEIDSLHLLMALLRTEPIGEHLG AMGVDIDALGADAIARMPKSQEKAEKPTRLSSSAQRSLFDAYQVARNYGSTYIDPDHLFLAFVFNPESPVSQLLAQHGIT GQSLQQAAMEQAQRAQNGGQEQGSEESDVSMLERYGTDLTALAADGQIDPVIGRDDELDQVVEILARRTKNNPVLIGEAG VGKTAIAEGLARAIVDDQVPEQIRGSRLISIDLPGMLAGTRYRGDFEQRLTGLLEEIADAEGQVLVFIDEMHLLVGAGSG ESGNMDAANILKPRLARGELHLIGATTLDEFRKVEKDSALARRFGKVTVAEPSEEVSLAILEGLRESYEDHHQVQYTPAA LKAAVALSARYLTDRQLPDKAIDLIDIAGARRSIAAGDTEDVQSLRAELVDAEREKSRAIGEERYEDASAWRDHITELTA RITAAEEAGDAGITRVVDEAQISEVISRSTGIPTSRITGDDKTRLASLEESLHASVIGQKDAVSAVARAVRRNRTGMSPA GRPIGSFLFLGPTGVGKTELAKALATNLFGSADSLLRVDMSEYGEKHTVARLIGAPPGYIGHDEPGQLTEKVRRNPYSVI LLDEIEKAHPDVFNVLLQVLDDGRLTDSAGRTVDFSNTLILMTSNLGGEYLANKAGNFGFTSTNATSEAHEVRAKVMGKV REFMRPEFLNRLDEVLLFSKLSQSEISQIVKLVIAETEARLNDQELQLEISDAAVQFLASEGYDPEFGARPLRRLVQRKV QDAIADLLIDDSLAAGDTVLVDYAANKLSVQKKAEMPTPPAHSEQVPSYFGN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 5e-142 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_003915546.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 7e-145 | 50 |
| clpC | YP_003915546.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 2e-153 | 45 |
