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Name : AARI_31360 (AARI_31360) Accession : YP_003918306.1 Strain : Arthrobacter arilaitensis Re117 Genome accession: NC_014550 Putative virulence/resistance : Unknown Product : deoxyribodipyrimidine photo-lyase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0415 EC number : 4.1.99.3 Position : 3505946 - 3507340 bp Length : 1395 bp Strand : + Note : identified by match to PF03441 and PF00875. DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation. This is DNA sequence : ATGAACCAATCACCGCTGCCGTTGCAGCTCATGTGGTTCCGGGATGACCTGCGCACCGCAGACAATCCGGCCTTGTCTTC TGCGCTGGCCGCAGGGCCAGTAATCGCAGTGTTCATCCTTGACCAGCAGTCCCCTGGCATCCGTCCATTAGGCGGTGCGG CAAAGTGGTGGCTGCATCACGGGCTGAAGAGCCTGCGGGCCGCATTGGAGGACCTGGGCATACCGCTGGTGCTGCGCAAG GGTCCTGCGGACAGCATCATGACGGAACTGGCCCGGCAAACCAATGCGCAGGCCGTTCACTGGAACCGGCGCTATGGCCA ACCGGAGCGCGCGGTGGATACCCGGGCCAAGACGGCACTGCGCGGCCTCGGGCGGGAAGCCCGCAGCTACCCCGGCACGC TATTGCACGAACCGTGGGAGCTGCTGACCAAGAAAGGGACCGGCTACAAGGTTTTCACCCCCTTCTACAACGCCCTGGGC GACAGCGCCATCAGGCCCCCACTGCCGGCGCCATTGGGACAGGACACCTTCAGCGCAGCCGGGATCCCGAACGGCCTCGA ACTGGAAGACCTCGAGCTGCTGCCAGCCACGGCGCAATGGACAGCTGGATTGGCCGCGCAGTGGGAGCCAGGCGAAGCCC CTGCCCGCCATCGGCTAGAAAATGTCCTGGAGTCAATTGCCCAGGATTACCCGGAGCATCATGACCGCCCCGATCTGGAC GGCACCTCTGCCTTGTCCCCGGCCCTGCGCTGGGGGCACCTGGGTGCCCACGAGATGTGGGACGCCCTGGGCCGGCTTGC CGCCGAGAATCCCAAGGCTGGTGCAGGTGCCACTGCCATGCGGCGCCAACTGGCATGGCGGGATTTCTGCTGGCACCTGT ATTACCATCACCCGCAGCTTCCGGACAGGAATCTGCGCACGGATTTCGACCACTTCGACTGGGTTTGGCCCGAGCAGGAC CAGCAGGTTGCCAGCTACGTGCAGCTATGGCAGAAAGGACGCACCGGCTTCGGGCTGGTGGATGCTGGCATGCAGCAACT ATGGCAGACCGGATGGATGCACAACCGGGTTCGCATGGTTGCAGCCAGCCTGCTGGTCAAGAATCTGCAAGTGCACTGGA AGGTCGGCGAGCGCTGGTTCTGGGACACCCTGGTGGATGCGGATATCGCCAGCAATACCGCCAATTGGCAGTGGGTTGCT GGCAGTGGTGCCGATGCGGCACCCTATTTCAGGGTCTTTAATCCGGAATTGCAGGCGAAGAAATTCGACCCGCAGGGAAG CTATGTCTCTCAGTTCGCGCCGTTGGCCGCACAGCCGATCGTGGATCTGAAGCAATCACGGCTCGACGCATTGGATGCCT ATGATCAGATGAAGCTCCGACTTGGCGAAATCTGA Protein sequence : MNQSPLPLQLMWFRDDLRTADNPALSSALAAGPVIAVFILDQQSPGIRPLGGAAKWWLHHGLKSLRAALEDLGIPLVLRK GPADSIMTELARQTNAQAVHWNRRYGQPERAVDTRAKTALRGLGREARSYPGTLLHEPWELLTKKGTGYKVFTPFYNALG DSAIRPPLPAPLGQDTFSAAGIPNGLELEDLELLPATAQWTAGLAAQWEPGEAPARHRLENVLESIAQDYPEHHDRPDLD GTSALSPALRWGHLGAHEMWDALGRLAAENPKAGAGATAMRRQLAWRDFCWHLYYHHPQLPDRNLRTDFDHFDWVWPEQD QQVASYVQLWQKGRTGFGLVDAGMQQLWQTGWMHNRVRMVAASLLVKNLQVHWKVGERWFWDTLVDADIASNTANWQWVA GSGADAAPYFRVFNPELQAKKFDPQGSYVSQFAPLAAQPIVDLKQSRLDALDAYDQMKLRLGEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP0113 | NP_938509.1 | riboflavin biosynthesis protein | Not tested | Not named | Protein | 6e-83 | 46 |
| CD241_0111 | YP_005124380.1 | putative riboflavin biosynthesis protein | Not tested | Not named | Protein | 5e-83 | 46 |
