Gene Information

Name : AARI_30470 (AARI_30470)
Accession : YP_003918220.1
Strain : Arthrobacter arilaitensis Re117
Genome accession: NC_014550
Putative virulence/resistance : Virulence
Product : iron/manganese/zinc ABC transporter ATP-binding subunit
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : 3.6.3.-
Position : 3418961 - 3419692 bp
Length : 732 bp
Strand : +
Note : TCDB: ATP-binding cassette (ABC) superfamily, Manganese/Zinc/Iron Chelate Uptake Transporter (MZT) Family (TC 3.A.1.15.z). ABCISSE: ABC transporter, ATP- binding protein (ABC), MET-family. This family is comprised of systems involved in the uptake of vari

DNA sequence : 
ATGCCCCCAGCTATTTCGCTTAAAGATGTCACTGTCCAATACGGTGCGATACGAGCACTAGAGCAAGTAACGCTGGATAT
CAATCCACACCGGGTCTGTGCTCTGATCGGCATGAACGGTTCGGGAAAATCTACCTTATTCAAGACCATCATGGGCCTGG
TTCACCCCGTCACAGGAACAGTTTTGGTTAATTCCCATAATCCTGCTGCAGAACGCAAACGTGCAGGAATCAGTTACGTC
CCGCAGCATGAAGACATCGATTGGGCATTCCCACTCTCCGTGCGCGAAGTCGTCATGACTGGACGTTACGGAAAGATGGG
ACTCACGCGCCGTGCTAGGACTGCCGACCATCAAGCCGTCAACGAAGCACTAGAAAAAGTGGAGCTCACCCAATACGCTG
ACCGGCAAATCGGCCAGCTTTCCGGAGGGCAGAAAAAACGCGCGTTCGTTGCTCGCGGCATCGCCCAAGAAGCGAAGATC
CTGCTCCTCGACGAGCCATTCGCAGGAGTGGACAAACGATCCGAAGCAACAATCACCCGTCTAATCCGCGAACTTGCCTA
TAAAGGTGCCACCGTTGTGGTGTCGACTCACGACCTACAAGCATTACCCGAACTAGCAGACGAGGCCATCCTTCTTATGC
GCCGAGTGCTGATGCACTCTTCTCCAGAAAATGTCCTTCAACCTGAGAATCTGGCTATGGCCTTCGGACTTGACGTGCTG
GCAAAAGGATAA

Protein sequence : 
MPPAISLKDVTVQYGAIRALEQVTLDINPHRVCALIGMNGSGKSTLFKTIMGLVHPVTGTVLVNSHNPAAERKRAGISYV
PQHEDIDWAFPLSVREVVMTGRYGKMGLTRRARTADHQAVNEALEKVELTQYADRQIGQLSGGQKKRAFVARGIAQEAKI
LLLDEPFAGVDKRSEATITRLIRELAYKGATVVVSTHDLQALPELADEAILLMRRVLMHSSPENVLQPENLAMAFGLDVL
AKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 4e-51 46
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-51 46
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-51 46
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-51 46
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-51 46
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 2e-37 41
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 2e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AARI_30470 YP_003918220.1 iron/manganese/zinc ABC transporter ATP-binding subunit BAC0440 Protein 4e-51 48
AARI_30470 YP_003918220.1 iron/manganese/zinc ABC transporter ATP-binding subunit BAC0350 Protein 2e-51 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AARI_30470 YP_003918220.1 iron/manganese/zinc ABC transporter ATP-binding subunit VFG0526 Protein 2e-51 46