Gene Information

Name : AARI_30200 (AARI_30200)
Accession : YP_003918190.1
Strain : Arthrobacter arilaitensis Re117
Genome accession: NC_014550
Putative virulence/resistance : Virulence
Product : iron-siderophore ABC transporter inner membrane subunit
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 3392390 - 3393454 bp
Length : 1065 bp
Strand : -
Note : TCDB: ATP-binding cassette (ABC) superfamily, iron chelate uptake transporter (FeCT) family (TC 3.A.1.14.z). ABCISSE: ABC transporter, permease (IM), ISVH-family (iron siderophores, vitamin B12 and hemin)

DNA sequence :
ATGCTTCCTGAGGAGACGCGCAGACGCCGAACCGGGGCCCTGCGCGCCATCCCTCTGACCGCCATCCTCATCGGGCTCCT
CTTCCTGCTTCTGACAGTGATGGTGATCAGCGTCGGTGTCGGCGCGGTATCGATCGCCCCCGGAGAGGTGATCGAGGTCA
TCTCCGGGCGCGTGGCGGGAAAACCCGAGCTTGGCTCCCTGGATTTCATCGTCTGGGAACTACGCATGCCGCGCGTGTTG
CAGGCCGCAGTGGTCGGCGCCGCCCTGGCAGTCGCCGGAGCGTGCGCACAGGTCCTCGTCCGCAACCCCATCGCCGACCC
CTACGTCCTCGGCCTGTCTTCCGGAGCCGGGGTCGCGGCGGTCCTGGTCATCACTTCCGTCGGTGTTACCACCTTCGGAG
TGCTGTTGCTCCCGGTCGCCTCTTTCGTCGGTGCCGCTGCGACCGGAATCATCGTCGCGGCCACAGCGACCTCACGCTGG
GGGATGTCCGCAGGCCGACTGGTGCTGTCCGGAGTCGCGATCGGTCAACTTCTCGGAGGGGTGATGTCCTTTCTCCTCAT
CCGATCCGGGAATTCCGATGCCACTCAGCAGGTGATGTTCTGGCTTCTCGGGAGTCTGGCAGGCGCCCAATGGCGACTGC
TGCTCGTCATCGGCCCCGTGATCATCGTCGCGATCGTTCTCGTCGCAATGTCTAGCGGGCGCCTTGACCTCCTCGGCCTC
GGAGACGCTCAAGCGGCCGCGTCAGGGGTGCATCCGGGGCGTTCCCGGGTGCTCGTCTTCGCTCTCGCTTCCCTGATGAC
CGGCGCCGCAGTCGCCGTCTCGGGGACTATCGGCTTCGTGGGCCTCATCGTGCCGCACATCGCCCGTCTCCTCGTGGGCG
GTATGCACAAGCGCGTCATTCCCGTGTCTGCGTTGCTGGGGGCGATCCTGCTCAGCTCGGCGGACCTCGCCGCGCGCACC
GTGCTAGCATCGTCAGAGCTTCCAGTCGGGATCTTCACCGCGGCGATCGGCGTGCCAATCTTCATCCTCCTCATGCGCAA
GAATCGCGCCATGGCCCTCTCATGA

Protein sequence :
MLPEETRRRRTGALRAIPLTAILIGLLFLLLTVMVISVGVGAVSIAPGEVIEVISGRVAGKPELGSLDFIVWELRMPRVL
QAAVVGAALAVAGACAQVLVRNPIADPYVLGLSSGAGVAAVLVITSVGVTTFGVLLLPVASFVGAAATGIIVAATATSRW
GMSAGRLVLSGVAIGQLLGGVMSFLLIRSGNSDATQQVMFWLLGSLAGAQWRLLLVIGPVIIVAIVLVAMSSGRLDLLGL
GDAQAAASGVHPGRSRVLVFALASLMTGAAVAVSGTIGFVGLIVPHIARLLVGGMHKRVIPVSALLGAILLSSADLAART
VLASSELPVGIFTAAIGVPIFILLMRKNRAMALS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01919 YP_003784319.1 hypothetical protein Not tested PiCp 7 Protein 4e-22 48
Cp1002_1913 YP_005682168.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 4e-22 48
CpC231_1907 YP_005684260.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 4e-22 48
CpI19_1928 YP_005686352.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 1e-21 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AARI_30200 YP_003918190.1 iron-siderophore ABC transporter inner membrane subunit VFG0922 Protein 2e-17 41