Gene Information

Name : AARI_27440 (AARI_27440)
Accession : YP_003917925.1
Strain : Arthrobacter arilaitensis Re117
Genome accession: NC_014550
Putative virulence/resistance : Unknown
Product : xylose isomerase-like protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1082
EC number : -
Position : 3082316 - 3083056 bp
Length : 741 bp
Strand : -
Note : match to protein domain PF01261: xylose isomerase- like TIM barrel. This TIM alpha/beta barrel structure is found in xylose isomerase and in endonuclease IV (EC.1.21. 2). This domain is also found in the N termini of bacterial myo-inositol catabolism prot

DNA sequence : 
TTGCCTGCCCACGACCTTTCAATCCAGCTGTACACGCTGCGCGAGCACATCGCCGAAGACCTGCCCTCGACCCTCGAACG
CGTAGCGGACATCGGCTACACCCAGGTTGAGCCGTACAGCTTCGTGGCCCGCGCCGACGAATACGCCCAGGCGCTGGCCA
AGAACAACCTGAGCGCGCCCACCGCACACGCGCCGCTGCTCTCATCGGACTTCGACGAGGTCTTCGCCGCGGCCAGCAAG
CTGGGCATCAGCACCGTGATCGATCCGTTCATTCCCGCCGAGCACTGGCAGGACGCCGAGTCCATCCGAGCCACCGCACA
GAAACTGAACGAAGCCTCCCGCCGAGGCGCCGAATACGGGATCAAGGTCGGCTACCACAACCACGACTGGGAAATCTCCA
GCAAGATCAACTCCACGACAGCCCTGGAATACTTCGCCAGCCTGCTGGATCCGGAAGTGGTCTTGGAAATCGACACCTAC
TGGGTGGCCGTGGGCGGCGCGGATGTGCTCCAGCTGCTTGAAGCACTGGCACCAAGGGTCATCGCCTTGCATATCAAGGA
CGGACCGAAATCCAAGAACCACAAGGAACAAGTGCCGGTAGGCAGCGGCTCCATGCCCATTGACCAGATCATCCAGGCCA
CCCAAGGCATGCTGCATGTGGTGGAACTCGATGACTTTGCAGGCGATATCTTCCAAGCCGTCTCAGCGAGCCGCGCCTAC
CTCGTAGCAGAAAAGAACTAG

Protein sequence : 
MPAHDLSIQLYTLREHIAEDLPSTLERVADIGYTQVEPYSFVARADEYAQALAKNNLSAPTAHAPLLSSDFDEVFAAASK
LGISTVIDPFIPAEHWQDAESIRATAQKLNEASRRGAEYGIKVGYHNHDWEISSKINSTTALEYFASLLDPEVVLEIDTY
WVAVGGADVLQLLEALAPRVIALHIKDGPKSKNHKEQVPVGSGSMPIDQIIQATQGMLHVVELDDFAGDIFQAVSASRAY
LVAEKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CMM_0034 YP_001220773.1 putative sugar phosphate isomerase/epimerase Not tested chp/tomA region Protein 4e-45 45
CMM_0111 YP_001220850.1 putative sugar phosphate isomerase/epimerase Not tested chp/tomA region Protein 8e-44 44