Gene Information

Name : AARI_15030 (AARI_15030)
Accession : YP_003916696.1
Strain : Arthrobacter arilaitensis Re117
Genome accession: NC_014550
Putative virulence/resistance : Virulence
Product : iron-siderophore ABC transporter inner membrane subunit
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 1732446 - 1733435 bp
Length : 990 bp
Strand : +
Note : TCDB: ATP-binding cassette (ABC) superfamily, iron chelate uptake transporter (FeCT) family (TC 3.A.1.14.z). ABCISSE: ABC transporter, permease (IM), ISVH-family (iron siderophores, vitamin B12 and hemin)

DNA sequence :
ATGACACCGCGCATCAGCTCACTGCTGATCCTGGCCGCCGGCGTGGGCGCCGCCATCGGGATCAGCCTGTGGATCGGCAG
CACCACCTCCAGCTTCGCCGAGCTGCGCCACGCACTGCTGGCTCCCGACGGGCAAGTCTCCGATATCGCGATCCGCGAGA
TCCGCTGGCCGCGCACCGTCACCGCGCTGGCCGCCGGGGCCGCCTTGGGCATGGCCGGCACGCTGATCCAGGGCCATACC
CGCAACCCGATCGCCGAACCCGGATTGCTGGGCATCAACCAGGGTGCGGCCCTGGCGATCGTCTCGGTCGTCGCATTCAC
CGGACCACTGCCAGCCTGGACCCAAGCGCTGCTGGCCCTGGGCGGGGCGCTGGCCGCGGCCCTGCTGGTCTTCGGCATCG
GGCGCATCGACGGGCGCGGGGGATCGCCCATCACCTTGCTGCTGGTGGGCGCCGCGGTCACCGCACTGTGCGCCGGGGTA
GTCTCGGCCATCGTGCTGCTCAGCGAAGCGGCACTGGAGACGTTGCGCTTCTGGCAGGTGGGCTCAGTAGTCCAAGGCTA
CGAATCCTTCCTGTCGCTGTGGCCGCTGCTGGTGGCCGGCACCGTGCTGGCCCTGGCCAATGCCCGCGGGCTGAACGCCC
TGACCCTGGGCGAGGACTCCGCGCGCAGCCTGGGAATCACCGCCCTGCATGCCAGATCCCTGGGACTGGCCGCGATCGTG
GCGCTCTCCGGGCTGGCGGTCACCCTGGCCGGTCCGATCGCCTTCCTGGGCCTGCTGGTGCCGCACATTTCGCGGCGCAT
CTTCGGCGCCGACTACCGCTGGATCATTCCCGGCTCCGCGTTATGCGGTGCACTGCTGCTGTGCGTGGCCGACGTGCTGG
GCCGCATGCTGGCCCGCCCCGGGGAACTGCCCGTAGGCGTGGTCATCGCAATGCTGGGCGCACCATTCTTCATCTATGTG
GCCCGGCGCCGCAAGGCGGTCACCGTATGA

Protein sequence :
MTPRISSLLILAAGVGAAIGISLWIGSTTSSFAELRHALLAPDGQVSDIAIREIRWPRTVTALAAGAALGMAGTLIQGHT
RNPIAEPGLLGINQGAALAIVSVVAFTGPLPAWTQALLALGGALAAALLVFGIGRIDGRGGSPITLLLVGAAVTALCAGV
VSAIVLLSEAALETLRFWQVGSVVQGYESFLSLWPLLVAGTVLALANARGLNALTLGEDSARSLGITALHARSLGLAAIV
ALSGLAVTLAGPIAFLGLLVPHISRRIFGADYRWIIPGSALCGALLLCVADVLGRMLARPGELPVGVVIAMLGAPFFIYV
ARRRKAVTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 3e-16 43
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 3e-16 43
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 3e-16 43
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 3e-16 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AARI_15030 YP_003916696.1 iron-siderophore ABC transporter inner membrane subunit VFG0926 Protein 1e-18 41