Gene Information

Name : AARI_01220 (AARI_01220)
Accession : YP_003915332.1
Strain : Arthrobacter arilaitensis Re117
Genome accession: NC_014550
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 128625 - 128822 bp
Length : 198 bp
Strand : +
Note : match to protein domain PF01381: helix-turn-helix

DNA sequence :
GTGCAGAACAACCTCAGCGAATACCGCAAGGAACACGGGTTCTCCCAACAGGCGTTGGCGGACCTGCTTGGCGTCTCGCG
GCAGACGATTATCTCGCTGGAAAAGGGCCGTTACGACCCGTCCTTGCCGCTGGCCTTCAAGCTTTCAGCGGTCTTCGGGT
GCAAGATCGAAGACCTCTTCATTCCAGGTGAAGACTAG

Protein sequence :
MQNNLSEYRKEHGFSQQALADLLGVSRQTIISLEKGRYDPSLPLAFKLSAVFGCKIEDLFIPGED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 7e-12 50
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-06 49
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-06 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AARI_01220 YP_003915332.1 transcriptional regulator VFG2168 Protein 8e-07 49
AARI_01220 YP_003915332.1 transcriptional regulator VFG2175 Protein 8e-07 49