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Name : AARI_09900 (AARI_09900) Accession : YP_003916178.1 Strain : Arthrobacter arilaitensis Re117 Genome accession: NC_014550 Putative virulence/resistance : Unknown Product : dipeptide/oligopeptide ABC transporter ATP-binding subunit Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : 3.6.3.- Position : 1113351 - 1115048 bp Length : 1698 bp Strand : + Note : TCDB: ATP-binding cassette (ABC) superfamily, peptide/opine/nickel uptake transporter (PepT) family (TC 3.A.1.5.z). ABCISSE: ABC transporter, fused ATP-binding protein (ABC2), OPN-family (oligopeptides and nickel), oligopeptides import DNA sequence : ATGAGCCACGCAGCACCAATGAATGAACAAGGCTCCGAAGACTTCGCGCTGAGCTTCGATGACCTCAACGTTGTTTTTGA AACCTCCGGTCCGGAAGTCCACGCCGTCAAGGGCTTGTCCCTGGCCGTGCGCCCCGGACAGGTGGTGGCGCTGGTAGGCG AGTCCGGTTCGGGCAAGTCGGTTACCTCCACCGCGGCGATGGGCTTGCTGCCAGGCAACGCCAACGTTACGGGTGTGGCC AAGGTCGGCAATGTCAACGTGGTGGGCCTGGATGAAGGCAAGTTGCGCAAGATGCGCGCCACCGACATTGCAATGGTCTT CCAGGAACCGATGACCGCACTGAATCCGGTGCTGACCATTGAGCGCCAGCTGACCGAAGCACTGGAACTGCACGACATCG CCTACGGCAAAGAGGCAACCGATCGAGCAGTGCAACTGCTTGAGATGGTTGGCATCCCAGATCCGGCCAAGCGCATTAAG CAGTATCCGCACCAGTTCTCCGGTGGACAGCGCCAGCGCATCGTTATTGCCATGGCGATCTCCTGCGATCCGAAGGTGAT CATCGCCGATGAGCCGACCACCGCACTGGACGTGACGGTTCAGGCCGAGATCCTTGACCTGCTGCGTGAGCTGAAAGACC GCTTGAACACCGGTATCTTGCTGATCACCCACAACATGGGTGTGGTTGCGGATATGGCTGATGAAGTCGCGGTGATGTTC CAGGGAAACCTCGTGGAGACCGGGACCGTGGAGCAGGTGCTGCTGCATCCAGAGCATCCATACACCCAGCGACTGCTGTC GTCGGTTCCGCGCTTATCTGCTCCGGCAGTGACCTCCGTGCAAGGAACGCACAGCTCCGAAACTGCACCGGCAGGACGGG AATTGGTGTTGGAAGCCAAGGACCTGGTGTTGGAATACGACATGCGGGGAAAGATCTTCCGTGCCGTTGAAAACGTCAGC TTTGATGTTGCCAAGGGCGAGGTTCTGGGCATTGTCGGTGAATCCGGTTCGGGCAAATCCACCATCGTCAAAGCCGTGCT CGGCCTGCTGCCGGTAGCCAGCGGTACCTTGTCGGTGAAGGGGCATGATCTTCCCAAGCTCTCGCCGAAGGAAGCACGCA AGGTCCGCAAGCAGATCGGTGTGATCTTCCAGGACCCTGCCGCATCGCTGAACCCGCGTTTCCCTATTGGCGATTGCATC ACCGAGCCCATGGTGGTTCATAAGGTGGGCACAAAGGCCGAACGCATCAAGCGCGCCGAAGAGCTGCTTGATGCCGTCAA GCTCCCGCGCAACGTGATCAACCGCTACCCGCACGAGCTCTCCGGCGGCCAGCGCCAGCGCGTTTGCATTGCGCGTGCAT TGACCTTGAATCCGGAGCTGCTGATCGCTGATGAGCCCACGAGTGCTTTGGACGTTTCGGTTCAGGCAGTTGTCTTGGAA ATGCTCCAGGACCTCCAGCGCGACTTCAACTTCGCCTGCTTGTTCGTCAGCCACGACTTGGCTGTGGTGGACATGCTCGC TGACGCGGTCGTAGTGATGCGGTCCGGCAAGGCAGTGGAACAGGGCATGGTTGAGTCGGTGCTGCACGCACCAACGCACG ACTACACCAGGCGCCTGTTGGCAGCGGCTCCAGTTCCGGACCCGCATGAGCAGGCATTGCGCCGCGAAGCTTGGCGCGTG CTGAACAGCACCAAGTAG Protein sequence : MSHAAPMNEQGSEDFALSFDDLNVVFETSGPEVHAVKGLSLAVRPGQVVALVGESGSGKSVTSTAAMGLLPGNANVTGVA KVGNVNVVGLDEGKLRKMRATDIAMVFQEPMTALNPVLTIERQLTEALELHDIAYGKEATDRAVQLLEMVGIPDPAKRIK QYPHQFSGGQRQRIVIAMAISCDPKVIIADEPTTALDVTVQAEILDLLRELKDRLNTGILLITHNMGVVADMADEVAVMF QGNLVETGTVEQVLLHPEHPYTQRLLSSVPRLSAPAVTSVQGTHSSETAPAGRELVLEAKDLVLEYDMRGKIFRAVENVS FDVAKGEVLGIVGESGSGKSTIVKAVLGLLPVASGTLSVKGHDLPKLSPKEARKVRKQIGVIFQDPAASLNPRFPIGDCI TEPMVVHKVGTKAERIKRAEELLDAVKLPRNVINRYPHELSGGQRQRVCIARALTLNPELLIADEPTSALDVSVQAVVLE MLQDLQRDFNFACLFVSHDLAVVDMLADAVVVMRSGKAVEQGMVESVLHAPTHDYTRRLLAAAPVPDPHEQALRREAWRV LNSTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 4e-104 | 45 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-64 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-64 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-64 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-64 | 42 |
