|
Name : AARI_09850 (AARI_09850) Accession : YP_003916173.1 Strain : Arthrobacter arilaitensis Re117 Genome accession: NC_014550 Putative virulence/resistance : Unknown Product : dipeptide/oligopeptide ABC transporter ATP-binding subunit Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : 3.6.3.- Position : 1104730 - 1106373 bp Length : 1644 bp Strand : + Note : TCDB: ATP-binding cassette (ABC) superfamily, peptide/opine/nickel uptake transporter (PepT) family (TC 3.A.1.5.z). ABCISSE: ABC transporter, fused ATP-binding protein (ABC2), OPN-family (oligopeptides and nickel), oligopeptides import DNA sequence : ATGACTGAAACTGCAACTCCAAAACCGCTGCTGGAAGTCAAGGATCTGGCGATTACCTTCTCCACTCCTGACGGCCCGGT CCATGCAGTGCGCGACGCCAACTTCACCGTGATGCCTGGCGAGACCGTGGCCATCGTGGGCGAATCCGGCTCGGGCAAGT CGACTTCGGCGTTGGCTGCTATCGGATTGCTGGCAGGCAACGGCAGGGTTTCCTCCGGACAGATCCTCTTTGACGGCGAA GACATTTCCAAGGCCAGCGAAAAGCGCTTCGTTGAGCTGCGCGGCAACCACATCGGCATGGTGCCGCAGGACCCGATGTC CAACCTGAACCCGGTTTGGAAGATCGGTTTCCAAGTCAAGGAAACTCTGAAGGCAAACGGCTTGGCGGGAGACAACCCGA ACAAGCGCGTGGCGCAGGTCCTGGCAGACGCAGGTTTGCCTGATCCTGAGACGCGTGCACGCCAGTACCCGCACGAGTTC TCCGGCGGCATGCGCCAGCGTGCGCTGATCGCCATCGGTCTTGCTTGCCGTCCGCGCTTGCTGATTGCCGATGAGCCAAC CAGCGCCCTGGACGTCACCGTGCAGCAACAGATCCTGGATCACTTGGACACCATGACCAGTGAGCTGGGCACCGCGGTGC TGCTGATCACCCACGACCTGGGCTTGGCAGCAGAGCGCGCCGAGAAGGTTGTCGTAATGTACAAGGGACGCGTTGTCGAA TACGGCCCGGCCTTGGAAATCCTGCGCAACCCGCAGCACCCTTACACCAAGCGCCTGATCAATTCCGCCCCTTCGCTCTC TGCACAGCGCGGGGACAAGCATGAGGCGATCGTTGACGAGGTAGTGCCTGGCAAGGCCGAGCCGCTGCTGAAGATCAGCA ATCTGACCAAGGTCTTCGACATCCGCAAGGGCTTCGGGAAGAAGGAGAAGTTCACTGCGGTGGACAACGTTTCCTTCGAG ATCCCCAAGGGCACCACTACCGCTGTGGTGGGAGAGTCCGGTTCGGGCAAGTCGACCATCGCCCAGATGGTGCTGAACCT GCTGGACAAGACCGCGGGCGAGATCATTTTCGATGGCGAACAAATCGGCAATCTGAACGAGAAGCACTTGTTCAAGTACC GCCGACGCGTGCAGCCGATCTTCCAGGATCCATATGGTTCCCTGGACCCGATGTACTCGATCTTCCGAACCATTGAAGAA CCGCTGCGCATCCACGGCATTGGCAACGCAGCCTCGCGCGAGAAGAAGGTCAAGGAGCTGCTGGAACAGGTCTCCATGCC GGCTTCAACCATGCACCGCTTCCCGAACGAGCTCTCCGGTGGCCAGCGCCAGCGCATCGCCATCGCGCGCGCTCTGGCTT TGCAGCCGGAAATGATTGTTTGCGACGAGGCGGTTTCGGCGCTGGACGTGCTGGTGCAGGCCCAGGTGCTGGAGCTGCTC GACGAGCTGCAGCGCGAGATGGGCTTGACCTACCTGTTCATTACCCACGACTTGGCTGTCGTACGCCAGATCGCAGACAA CGTTTGCGTGATGGAACGAGGCAAGATCGTTGAGCAGGGAACGGCGGATGAGATTTTCGCTTCGCCGAAGAGCGCCTACA CCCGCAATCTGCTGGCTGCGATTCCAGGTGCTTCGCTGATCTAG Protein sequence : MTETATPKPLLEVKDLAITFSTPDGPVHAVRDANFTVMPGETVAIVGESGSGKSTSALAAIGLLAGNGRVSSGQILFDGE DISKASEKRFVELRGNHIGMVPQDPMSNLNPVWKIGFQVKETLKANGLAGDNPNKRVAQVLADAGLPDPETRARQYPHEF SGGMRQRALIAIGLACRPRLLIADEPTSALDVTVQQQILDHLDTMTSELGTAVLLITHDLGLAAERAEKVVVMYKGRVVE YGPALEILRNPQHPYTKRLINSAPSLSAQRGDKHEAIVDEVVPGKAEPLLKISNLTKVFDIRKGFGKKEKFTAVDNVSFE IPKGTTTAVVGESGSGKSTIAQMVLNLLDKTAGEIIFDGEQIGNLNEKHLFKYRRRVQPIFQDPYGSLDPMYSIFRTIEE PLRIHGIGNAASREKKVKELLEQVSMPASTMHRFPNELSGGQRQRIAIARALALQPEMIVCDEAVSALDVLVQAQVLELL DELQREMGLTYLFITHDLAVVRQIADNVCVMERGKIVEQGTADEIFASPKSAYTRNLLAAIPGASLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 5e-163 | 63 |
