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Name : clpC (AARI_01020) Accession : YP_003915312.1 Strain : Arthrobacter arilaitensis Re117 Genome accession: NC_014550 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 110617 - 113139 bp Length : 2523 bp Strand : + Note : ATP-dependent Clp proteases act as chaperones to target the proteases to substrates DNA sequence : GTGCCGAAGATGTTTGAGAGATTTACCGACCGTGCCCGTCGAGTTGTCGTGCTCGCCCAAGAAGAGGCGCGCATGCTCAA CCACAATTACATCGGCACCGAGCACCTGCTGCTCGGTCTAATCCACGAAGGTGACGGTGTTGCCGCAAAGGCACTCGAGT CGCTGAATATTTCGTTGGGTGCCGTGCGTGAGCAGGTTCAGGAGATTATCGGCAAGGGCCAGCAGGCGCCTTCCGGTCAT ATCCCGTTCACTCCTCGCGCCAAGAAAGTTTTGGAGCTCTCGCTGCGTGAAGCGCTGCAGCTGGGACATAACTACATTGG TACCGAGCACATCCTGCTCGGCCTGATCCGCGAAGGCGAAGGCGTCGCAGCCCAGGTTCTGGTGAAGCTGGGTGCTGACC TCGGTCGCGTGCGCCAGCAGGTCATCCAGCTGCTCTCGGGCTACCAGGGCGGCAAGGAAACTGCCTCCGCCGGCGTCAGC TCGGGCGGCCAGCAGGAGGGCACCCCAGCGGGTTCCGCCGTGCTGGACCAGTTCGGTCGAAACCTCACCGCAGCTGCCCG TGAAGGCAAGCTCGATCCGGTGATTGGCCGCGAGCACGAGATGGAACGCGTTATGCAGGTCCTCTCGCGCCGTACCAAGA ACAACCCTGTTCTGATTGGTGAGCCTGGCGTTGGCAAGACCGCAGTCGTCGAAGGCTTGGCCCAGTCGATCGTGCGCGGC GATGTACCGGAAACCATCAAGGACAAGCAGCTGTACACCTTGGACCTCGGTTCACTGGTTGCAGGTTCGCGCTACCGCGG TGACTTCGAGGAACGCCTGAAGAAGGTCTTGAAGGAAATCCGTACCCGTGGCGACATCATCTTGTTCATCGATGAGATCC ACACCCTGGTAGGTGCCGGTGCGGCCGAAGGCGCTATCGATGCTGCTTCGATCCTCAAGCCAATGCTGGCTCGTGGCGAA CTGCAGACCATCGGTGCGACCACCTTGGACGAGTACCGCAAGAACATTGAGAAGGATGCAGCGCTCGAGCGCCGCTTCCA GCCAATCCAGGTCAAGGAGCCTTCGGTTGAGCTGACCACGCAGATCCTGCGTGGCCTGCGTGACCGCTACGAGGCGCACC ACCGCGTGACCATCACTGATGGCGCGCTGCAGGCTGCCGCCACCTTGGCGCATCGCTATATCTCTGATCGCTTCCTGCCG GATAAGGCAGTGGACCTGATCGATGAGGCCGGTGCCCGACTGCGCATCCAGCGCATGACCGCTCCTCCTGCCCTGAAGGA AATGGACGAGGAAATCGCCACCGTGCGCTTGGAGAAGGAAGCTGCGATTGACGCGCAGGACTTCGAAGGTGCCGCATCGC TGCGTGACAAGGAATCCAAGCTCATCGAGGCTCGTAACGAGAAGGAGAAGTCCTGGCGCAATGGCGACATGGACGAGGTC TCCGAGGTGACCGAGGAACTCATCGCCGAAGTCTTGGCTAACTCCACCGGCATCCCGGTAGTGAAGCTGACCGAGGAAGA GTCCTCGCGACTGCTGAACATGGAAGATGAGCTGCACAAGCGCGTTATCGGCCAGGATTCAGCGATCAAGGCCATCTCCC AGGCGATCCGCCGTACCCGTGCAGGCCTGAAAGATCCGAACCGCCCAGGCGGCTCGTTCATCTTCGCCGGCCCAACCGGC GTAGGCAAGACTGAGCTGGCCAAGGCGCTGGCAGAGTTCCTGTTCGGTGAAGAAGAGGCACTGATCACCCTGGATATGTC CGAATACTCGGAGAAGCACACCGTTTCCCGTCTGTTCGGTGCCCCTCCGGGCTACGTCGGCTACGAAGAAGGCGGACAGC TGACCGAGAAGGTTCGCCGCCGTCCATTCTCCGTCGTGCTCTTCGATGAGGTCGAGAAGGCCCACGCTGACCTGTTCAAC TCGTTGCTGCAGATCCTGGAAGACGGCCGCCTGACCGACTCCCAGGGCCGCGTGGTGGACTTCAAGAACACCATCATCAT CATGACCACCAACCTCGGTACCCGCGACATCTCCAAGGGTGTGATGACCGGCTTCCAGTCGGCCGCGGATACCAAGACCG GTTATGAGCGCATGCAGGCCAAGGTCCAGGAAGAACTGCGTCAGCATTTCCGCCCTGAATTCTTGAACCGCGTTGATGAC ACCGTCGTCTTCCCGCAGCTGAACCAGGACGAGATCGAAGAGATCGTCGACTTGTTCGTCGCCCGTCTGGCCAAGCGCCT GAAGGATCGCGATATGACCATCGAGCTGACTCAGGCTGCACGCAGCCTGCTGGCACAGCGCGGCTACGACCCAGCCATGG GTGCCCGTCCGCTGCGCCGTACCATCCAGCGCGATATCGAAGATCAGCTCTCCGAGCGGATCCTCTTCGGGCAGATCGTT GCCGGACAGAAGATCACCGTGGACGTCGAAGGCGAAGGCGAGCTGCAGAAGTTCGTCTTCCACGCCGAGGGCGGCACCGG CCAGCTGGAAGGCGAGCCGGCACCGGCTGCGTTGGAAAGCTAG Protein sequence : MPKMFERFTDRARRVVVLAQEEARMLNHNYIGTEHLLLGLIHEGDGVAAKALESLNISLGAVREQVQEIIGKGQQAPSGH IPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLGRVRQQVIQLLSGYQGGKETASAGVS SGGQQEGTPAGSAVLDQFGRNLTAAAREGKLDPVIGREHEMERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQSIVRG DVPETIKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGE LQTIGATTLDEYRKNIEKDAALERRFQPIQVKEPSVELTTQILRGLRDRYEAHHRVTITDGALQAAATLAHRYISDRFLP DKAVDLIDEAGARLRIQRMTAPPALKEMDEEIATVRLEKEAAIDAQDFEGAASLRDKESKLIEARNEKEKSWRNGDMDEV SEVTEELIAEVLANSTGIPVVKLTEEESSRLLNMEDELHKRVIGQDSAIKAISQAIRRTRAGLKDPNRPGGSFIFAGPTG VGKTELAKALAEFLFGEEEALITLDMSEYSEKHTVSRLFGAPPGYVGYEEGGQLTEKVRRRPFSVVLFDEVEKAHADLFN SLLQILEDGRLTDSQGRVVDFKNTIIIMTTNLGTRDISKGVMTGFQSAADTKTGYERMQAKVQEELRQHFRPEFLNRVDD TVVFPQLNQDEIEEIVDLFVARLAKRLKDRDMTIELTQAARSLLAQRGYDPAMGARPLRRTIQRDIEDQLSERILFGQIV AGQKITVDVEGEGELQKFVFHAEGGTGQLEGEPAPAALES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 74 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-94 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_003915312.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 0.0 | 61 |
| clpC | YP_003915312.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 3e-145 | 52 |
