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Name : hsdM (AARI_pI00110) Accession : YP_003915183.1 Strain : Genome accession: NC_014549 Putative virulence/resistance : Unknown Product : type I restriction-modification system modification subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : 2.1.1.72 Position : 11674 - 13635 bp Length : 1962 bp Strand : - Note : type I restriction endonucleases are components of prokaryotic DNA restriction-modification mechanisms that protects the organism against invading foreign DNA. They have three different subunits: subunits - M (modification), S (specificity) and R (restric DNA sequence : ATGAGCAAGCACGCGACATTCATTTGGGGCATCGCTGACCTCCTTAGAGGCAACTTCAAAGCCCACCAGTACGGGGATTT CATCCTCCCCTTCACCGTACTGCGCCGCTTGGACTCTGTCCTGGCAGACACCAAGTCCAAGGTGCTTGAAGTCGTTGCCG AGGCAGATGCCAAGGGCCTATCGGTGCGCCCGGTATTGCTCAAGACCAAGGCTGGCCACCAGCACTCCTTCTATAACACC AGTCAATACGATCTGGGCACCCTCATCGGGGACGCAGAAAATCTCAGGGAAAACCTCCTTTCCTACATCAACGCGTTCTC CGAGAACGTGCGCGACATCTTCGTGAAATACAAGATCGAAGACCGCATCGAAGAACTCGAAGAGAACAACCTGCTGCTGC TGGTGATCCAGCGTTTCGCCGAAGTTGATCTGCACCCGAAACACGTCTCCAATGACAAGATGGGTCACATCTTCGAAGAA CTCATCCGCAAGTTTGCTGAGGCCTCCAACGAAACTGCCGGTGAGCACTTCACGCCCCGCGAAGTCATCGAACTCATGGT CGACCTGCTCTTCGAGAACGACGATGAGGCACTGCGCGATGAGGACATCGTCCGCTCCGTCTACGATCCGACCGCCGGCA CCGGCGGCATGCTCTCGGTCGCTGAAGACCACCTCACTGCTATGAACCCCAGGGCTCGTCTCACCCTGGCCGGCCAGGAA CTGAATCCGCAGTCCTACGCGATCTGCAAGGCCGATATGGTCATCAAGGGCCAGTCAGTCGACGCCATCGTCAACGACGA TACGCTGCGCCATGACGGACACGCAGGAACTACCTTCAACTACTGCCTATCTAACCCGCCGTTTGGTGTGGACTGGAAAA AGCAGGAAAAGGCAGTGCGTGAAGAACACGCAGAAAAGGGGTTCGCCGGCCGCTTCGGACCAGGCTTGCCGCGTGTCTCG GACGGATCCATGCTCTTCCTGCTGCACCTGATTTCCAAAATGCGCGAACCAGCCCACGGATCCGCCGGAGGCCGTGCCGC TATCGTCCTCAACGGTTCTCCGCTGTTCACCGGTGGTGCAGGATCCGGCGAATCAAACATCCGCAAATGGATCCTGGAAC GCGACTACTTGGAAGCGATTATCGCCCTGCCAACCGACATGTTCTACAACACCGGCATCAGCACCTACATTTGGGTGCTC TCCAAGGAGAAGTCCCCAGAACGCCGCAATAAGGTACAACTGGTTGATGGATCTAAACTGTTCCGGAAGATGCGCAAGGG ACTGGGTTCCAAACGCAACGAACTAGGCCCAGAAGACATTCAAGCAATTGTAAGACTCTACGGCGACTTCACAGAGACCG ATCAATCGAAGATCTTCAACACCACTGATTTCTTCTACCGAACCATCACCGTTGAACGCCCGCTGAAGCTGAACTTCGCC ACCACCACAGAACGCATCGACACCGCCCTGGCAGCCAAGCCTTTAGGAAAGCTCACCGCCGATGCAGTAGCCGATCTACG CACTGCGTTGGATTCCATGGATGCTACCGTGCTGTGGAAAAACCGCGACAACTTCACCACGGGACTTAAAAGGACGCTCA AGGCAACTGGTGTCGAGTTGAGCACTCCGCAGCTCAAGGCCCTCATCGCCGGTCTTTCCAAACGAGACGACACTGCCGAC GTCTGCACTGGGCCCAAAAGCAAGATCGAACCGGATGCTGAGCTCCGCGACACCGAAAATGTCCCTTGGAACGAGGACAT CCACGCCTATATAGAACGTGAGATCAAGCCCTTTGTGCCCGATGCTTGGCTCGACGAGGAGAAGACGAAGGAAGGCTGTG AGATTCCTTTCACCCGCCACTTCTACCAATACATTCCCCCACGCCCGTTGGAAGAGATTGATGCGGATCTCGACGCGGTC CTCGGCCGCATCCGTGCACGTCTTGAGCAGGTTAAGGCATGA Protein sequence : MSKHATFIWGIADLLRGNFKAHQYGDFILPFTVLRRLDSVLADTKSKVLEVVAEADAKGLSVRPVLLKTKAGHQHSFYNT SQYDLGTLIGDAENLRENLLSYINAFSENVRDIFVKYKIEDRIEELEENNLLLLVIQRFAEVDLHPKHVSNDKMGHIFEE LIRKFAEASNETAGEHFTPREVIELMVDLLFENDDEALRDEDIVRSVYDPTAGTGGMLSVAEDHLTAMNPRARLTLAGQE LNPQSYAICKADMVIKGQSVDAIVNDDTLRHDGHAGTTFNYCLSNPPFGVDWKKQEKAVREEHAEKGFAGRFGPGLPRVS DGSMLFLLHLISKMREPAHGSAGGRAAIVLNGSPLFTGGAGSGESNIRKWILERDYLEAIIALPTDMFYNTGISTYIWVL SKEKSPERRNKVQLVDGSKLFRKMRKGLGSKRNELGPEDIQAIVRLYGDFTETDQSKIFNTTDFFYRTITVERPLKLNFA TTTERIDTALAAKPLGKLTADAVADLRTALDSMDATVLWKNRDNFTTGLKRTLKATGVELSTPQLKALIAGLSKRDDTAD VCTGPKSKIEPDAELRDTENVPWNEDIHAYIEREIKPFVPDAWLDEEKTKEGCEIPFTRHFYQYIPPRPLEEIDADLDAV LGRIRARLEQVKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAS0027 | YP_042160.1 | type I restriction enzyme methylase | Not tested | SCC476 | Protein | 6e-105 | 47 |
