Gene Information

Name : Fbal_3729 (Fbal_3729)
Accession : YP_003914996.1
Strain : Ferrimonas balearica DSM 9799
Genome accession: NC_014541
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4198975 - 4199652 bp
Length : 678 bp
Strand : +
Note : COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: sse:Ssed_4392 two component transcriptional regulator; PFAM: response regulator receiver; transcription

DNA sequence : 
ATGAAGATCCTGATCATTGAAGACGACGCCACCAACCGCCAGTACCTGAGCAAAGGCTTCAGCGAACAGGGCTACGTGGT
GGATTGCGCTGAAGACGGCCAGCAGGGGCTGATGCTGGCCACCAGCGAAAGCTACCGCCTGATTGTGCTCGACCGCATGC
TGCCCAAGCTCGAGGGGCTGGCCCTGCTGGCCGCCCTGCGCGCCACCGGCAACACCACTCCGGTGGTGATCCTGTCAGCG
CTGGGGGATGTGGATGAACGCATCAAAGGGCTGCGCGCCGGCGGCGACGACTACATGGTCAAACCCTTCTCCTTTGCCGA
GCTGCTGATCCGGGCCCAGCGCCTGATGGAGCGGCCCAGCAACGACAGCCGCCCGAGCCAGCTCAGCCTAGCCAACCTGC
ATCTCGATCTGTTGGCCCACAAAGCCCGGGTGGATGACCACACCATGACCCTGCAGCCCAAGGAGTTCCAACTGCTGCGC
TTTCTGCTGGAGCACCAGGGCCAGCTGCTGACCCGCACCCTGCTGTTCGAATCGGTGTGGGACTACCACTTTGACCCCGG
CACCAACGTGATCGACGTGCACATCGCCCGGCTGCGCAAAAAACTGCAGGAAGCCGGTGCACGGGTGCACATCGAAACCG
TGCGCGGCGCCGGTTACCGCATCGGCCCGGCAACTTGA

Protein sequence : 
MKILIIEDDATNRQYLSKGFSEQGYVVDCAEDGQQGLMLATSESYRLIVLDRMLPKLEGLALLAALRATGNTTPVVILSA
LGDVDERIKGLRAGGDDYMVKPFSFAELLIRAQRLMERPSNDSRPSQLSLANLHLDLLAHKARVDDHTMTLQPKEFQLLR
FLLEHQGQLLTRTLLFESVWDYHFDPGTNVIDVHIARLRKKLQEAGARVHIETVRGAGYRIGPAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-36 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-34 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fbal_3729 YP_003914996.1 two component transcriptional regulator, winged helix family BAC0347 Protein 4e-40 46
Fbal_3729 YP_003914996.1 two component transcriptional regulator, winged helix family BAC0111 Protein 4e-42 45
Fbal_3729 YP_003914996.1 two component transcriptional regulator, winged helix family BAC0197 Protein 4e-35 44
Fbal_3729 YP_003914996.1 two component transcriptional regulator, winged helix family BAC0125 Protein 6e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fbal_3729 YP_003914996.1 two component transcriptional regulator, winged helix family VFG0596 Protein 3e-36 43
Fbal_3729 YP_003914996.1 two component transcriptional regulator, winged helix family VFG1389 Protein 2e-30 41