Gene Information

Name : Fbal_0215 (Fbal_0215)
Accession : YP_003911503.1
Strain : Ferrimonas balearica DSM 9799
Genome accession: NC_014541
Putative virulence/resistance : Virulence
Product : type II secretion system protein E (GspE)
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 236816 - 238360 bp
Length : 1545 bp
Strand : +
Note : COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482: IPR003593: IPR013369; KEGG: saz:Sama_0170 general secretion pathway protein E; PFAM: type II secretion system protein E; SMART: ATPase AAA; SPT

DNA sequence :
ATGACTGAGGCGGAACGTCAGGAACTCCTGACTGAACTGCCGGAGGTGCCTGAACAGGCGGAAGAGATTCTGCCCGGGCG
CCTGCCCAAGTTGCCCTTTGCCTTTGCCCGTCGCTTTGGCGTCATGCTGGTGCCTCAGGACGAGCAGTTGGTGCTGTGGT
ACAGCCCCAGCGCCCGTCCCAAGGCGCTGCTGGAAGCCCGTCGCCTGGCTGGTGGCCCGGTAGCGCTGAATGGGGTCGAC
AGCAACGCGTTCGACATCAAGCTGACCGAGCTGTACCAGCAGGACTCCTCCGAAGCCCAGCAGCTGATGGAGGACATCGG
CAAAGACGACGACCTGGCCTCGCTGGCGGATGAACTGCCGGAAACCGAAGACCTGCTCGACGCCGACGACGACGCGCCGA
TCATCCGTTTGATCAACGCCCTGTTGTCGGAATCGATCAAGCTGGGGGCGTCCGATATTCACGTCGAAACCTACGAGAAG
GAGCTGGTGGTCCGGTTCCGCATCGATGGCGTGTTGCAGGAGGTGCTGAAACAGCAGCGCAAGATTGCGCCGTTGCTGGT
TTCCCGTATCAAGGTAATGGCCAAGCTGGATATCGCTGAAAAGCGGGTCCCGCAGGATGGTCGTATCTCCCTGCGCATCG
GCGGCCGCGCTGTCGATGTGCGGGTGTCCACCATGCCCAGCTCCCGCGGCGAGCGGGTGGTGATGCGTCTGCTGGATAAG
AACCAGTCGGTGCTGAACCTGGAACAGCTGGGCATGGCAGAGGGGATCCGCGGCCAGTTCAACAGCCTGATCCGCCGTCC
TCACGGCATCCTGCTGGTCACCGGCCCTACCGGTTCCGGTAAGTCCACCACCCTGTACGCAGGCCTGACAGAGATCAACA
GCCGGGATCGCAATATCCTGACCGTTGAAGACCCGATCGAATACGAGCTGGAAGGGATTGGTCAGACTCAGGTGAACACC
AAAGTCGATATGACCTTTGCCCGCGGCTTGCGCGCCATTCTGCGTCAGGACCCGGATGTGGTGATGGTGGGTGAGATCCG
TGACCTGGAAACCGGCCAGATTGCCGTTCAGGCCTCATTGACCGGTCACCTGGTATTGTCGACCCTGCACACCAACACCG
CTTCCGGTGCCATCACCCGTCTGCAGGACATGGGCATCGAGCCCTTCCTGATCTCCTCCTCATTGCTGGGGGTGTTGGCT
CAGCGCCTGGTGCGCACCCTGTGCCCGGAGTGTAAGAGTCCCTATACCCCTAACGCCCGCGAGCGTTCGTTTCTGGAGCT
GGGGCAGGGGGAACAACCCACCATCTACAAGGCGGTCGGTTGTGAACACTGCAACTTCAGTGGCTACAAGGGCCGAACCG
GTATTCATGAGTTGCTGGTGGTGGACGACACCATCCGGGAACTGATCCACGGTGGCCGCGGAGAGCTGGCCATCGAGAAG
CACGTACGTCAAACCGCGCCCTCCATCCGCCAGGATGGCTGCGGCAAGGTCCTCGCCGGGATGACCACCTTGGAGGAAGT
GCTGCGGGTGACCCGGGAGGAGTAA

Protein sequence :
MTEAERQELLTELPEVPEQAEEILPGRLPKLPFAFARRFGVMLVPQDEQLVLWYSPSARPKALLEARRLAGGPVALNGVD
SNAFDIKLTELYQQDSSEAQQLMEDIGKDDDLASLADELPETEDLLDADDDAPIIRLINALLSESIKLGASDIHVETYEK
ELVVRFRIDGVLQEVLKQQRKIAPLLVSRIKVMAKLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSRGERVVMRLLDK
NQSVLNLEQLGMAEGIRGQFNSLIRRPHGILLVTGPTGSGKSTTLYAGLTEINSRDRNILTVEDPIEYELEGIGQTQVNT
KVDMTFARGLRAILRQDPDVVMVGEIRDLETGQIAVQASLTGHLVLSTLHTNTASGAITRLQDMGIEPFLISSSLLGVLA
QRLVRTLCPECKSPYTPNARERSFLELGQGEQPTIYKAVGCEHCNFSGYKGRTGIHELLVVDDTIRELIHGGRGELAIEK
HVRQTAPSIRQDGCGKVLAGMTTLEEVLRVTREE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 2e-140 63
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-140 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fbal_0215 YP_003911503.1 type II secretion system protein E (GspE) VFG0182 Protein 1e-140 66
Fbal_0215 YP_003911503.1 type II secretion system protein E (GspE) VFG2048 Protein 2e-140 63
Fbal_0215 YP_003911503.1 type II secretion system protein E (GspE) VFG1876 Protein 9e-127 59
Fbal_0215 YP_003911503.1 type II secretion system protein E (GspE) VFG2426 Protein 3e-71 45