Gene Information

Name : BC1003_3866 (BC1003_3866)
Accession : YP_003909096.1
Strain :
Genome accession: NC_014540
Putative virulence/resistance : Virulence
Product : Betaine-aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.8
Position : 392800 - 394308 bp
Length : 1509 bp
Strand : -
Note : KEGG: bmj:BMULJ_04931 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase

DNA sequence :
ATGAACGACAACAGCAGGCCTCTCGACATGCTCGATTCCACGCGGACCTTTCTCGCTGCGCCAAAGCGCATGTTTATCGA
CGGCGAATGGCGCGCAAGCGCAAGCGGCGCGACGCTCGACGTTTTGAATCCCGCAGACGGCAGCCTGCTTGCACAGGTGC
CGAGCGCCGACGAAGCCGACGTGGACCTCGCCGTGCAAGCCGCCCGCCGCGCATTCGACGACTCCGCCTGGTCGCGCATG
AAGCCGACCGACCGCGAGCGCATTCTGTTGCGCGTCGCTGAACTGATCGAGGCGAATGCGCGCGAGCTGGCGGAGATCGA
ATCGCTCGACAACGGCAAGCCCGTTGCCGTTGCGCAGGGGCTTGACGTGTCGATGGCCGCGCAGTGCTTTCGCTATATGG
CCGGATGGGCGACGAAGATCGAGGGCAGCACACTCGATGCGGCGCTGCCGTACAGCCCGTCGAACGCGTTTTTTGCGTAC
ACGCGCAAGGAAGCCGTGGGCGTCGTGGGCGCGATCATTCCGTGGAATTTCCCGCTGCTGATGGCGTCGTGGAAGCTCGC
ACCCGCGCTCGCCACCGGCTGCACCGTGGTGCTCAAACCCGCCGAGGATACGCCGCTCTCCGCGCTTCGCCTCGCCACGT
TGCTGAGCGAGGCCGGCTTGCCAAAGGGAGTGGTCAACATCGTTACGGGCTACGGGCGCAGCGCGGGCGCCGCGCTCGCG
CGTCATCCGGGGATAGACAAGATCGCTTTTACCGGATCGACGCAGACCGGCAAGGCCATTGGCCATGCGGCGCTCGACAA
CATGACGCGCATGTCGCTCGAGCTGGGCGGCAAGTCGCCGGTGATCGTGCTGCCCGATGTGGATATTGAAAGGGCGGCCG
AAGGCGTTGCGAACGCGATTTTCTTCAACTCCGGCCAGGTGTGTACGGCGGGCTCGCGCGTGTATGTGCACGAGACGGTA
TTCGACCGCGTCATGGAGCGGGTGGCAGCCATTGCAGAGGCCTTGCCTGTCGGTCCTGGGCTCGATGCGAACACGCAGAT
CGGGCCGCTCGTATCGGCGCGTCAGATGGACCGCGTGCTCGGCTATATCGAAGCGGGCCGCGACGAAGGCGCGCGCGCGA
TTGCAGGCGGCGCGCGCGAGGGCGGTGCGGGCTTCTTCGTGAAGCCGACTGTGCTCGTCGACACCGATCACTCCATGCGT
GTGGTGCGGGAAGAGATTTTCGGCCCGGTGCTGGTCGCGATGCCGTTCAAGGATATCGACAGCGCGGTCGCGCAAGCGAA
CGACACGCCCTATGGTCTCGGCGCAAGCATCTGGTCCAACAATCTTTCTGCGATCCACAATCTGATTCCACGCATCAAGG
CAGGCACGGTGTGGGTGAACTGCCACTCGCTGCTCGATAACGCGATGCCGTTTGGCGGCGTCAAGCAGTCTGGCTTTGGC
CGCGAGCTGGGTCGCGCGGTGATCGACATGTACACCGAAATGAAGTCGGTGCTCATCAACCACGCTTGA

Protein sequence :
MNDNSRPLDMLDSTRTFLAAPKRMFIDGEWRASASGATLDVLNPADGSLLAQVPSADEADVDLAVQAARRAFDDSAWSRM
KPTDRERILLRVAELIEANARELAEIESLDNGKPVAVAQGLDVSMAAQCFRYMAGWATKIEGSTLDAALPYSPSNAFFAY
TRKEAVGVVGAIIPWNFPLLMASWKLAPALATGCTVVLKPAEDTPLSALRLATLLSEAGLPKGVVNIVTGYGRSAGAALA
RHPGIDKIAFTGSTQTGKAIGHAALDNMTRMSLELGGKSPVIVLPDVDIERAAEGVANAIFFNSGQVCTAGSRVYVHETV
FDRVMERVAAIAEALPVGPGLDANTQIGPLVSARQMDRVLGYIEAGRDEGARAIAGGAREGGAGFFVKPTVLVDTDHSMR
VVREEIFGPVLVAMPFKDIDSAVAQANDTPYGLGASIWSNNLSAIHNLIPRIKAGTVWVNCHSLLDNAMPFGGVKQSGFG
RELGRAVIDMYTEMKSVLINHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 6e-84 47
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-81 43
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-84 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-84 42
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-84 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-84 42
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 4e-65 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1003_3866 YP_003909096.1 Betaine-aldehyde dehydrogenase VFG0082 Protein 4e-81 43