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Name : BC1003_5991 (BC1003_5991) Accession : YP_003911191.1 Strain : Genome accession: NC_014540 Putative virulence/resistance : Unknown Product : Integrase catalytic region Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 2833601 - 2835118 bp Length : 1518 bp Strand : - Note : PFAM: Integrase catalytic region; KEGG: rpf:Rpic12D_4688 integrase catalytic region DNA sequence : GTGGCTATATTGAGCATCATCCGACGCTGGCACTTTCGCGATCATGTCTCTTTGCGCGAGATTGCCAAACGGCTGGGCGT GTCCAGAAACACGGTCAGGCGTTACATACGGGCCGGTACGGTCCTGCCCGCCTATCCGGAACGACACAGTCCCAGCAAGC TCGACGGGTTTGCCGCGAAGCTCTCGGGCTGGCTGAAGACCGAAGCGAACCGGCCCCGCAAGCAGCGAAGAACCCTGAAG CAGATCCACGCAGATCTGTGCGCGCTCGGCTTCACCGGCTCCTACGACCGGGTGGCGGCGTTCGCCCGGCGCTGGCGGCA GGAACAACACGAGCAGGCAAAGACAACTGGACGGGGAACGTTCGTGCCGCCCCGGTTTGCCGCTGGCGAAGCGTTCCAGT TCGACTGGAGCGAGGACTGGGCCGTTATCAATGGCGAGCGCACCAAGCTGCAGGTCGCGCAGCTCAAGCTCAGCCACAGC CGCGCCTTCTTCCTGCGTGCCTACCTGCTTCAGACTCACGAGATGCTGTTCGACGCTCACTATCACGCGTTCGTCGCCTG GGGCTGCATTCCACGCCGCGGCATCTATGACAACATGAAGACCGCCGTTGACAGAGTGCGACCCGGCAAGGTGCGCGAGG TCAACGCGCGCTTCAGCGCGATGGTTAGCCACTACCTGTTTGACGCCGAGTTCTGCAATGTCGCCTCGGGCTGGGAGAAG GGGCAGATAGAGAAGAACGTCCAGGACAGCCGTCACCGGCTGTGGCAGAAAGCGCCGGCGTTCGGCTCGCTCGCCGCGCT TAACGACTGGCTGGCCGACCAGTGCGTGCTGCTGTGGCAACAGACGCGGCACCCGGAGCACCACACGACCATTTGGGATG CGTGGGCGGCCGAGCGCCCACACCTGATGCCGGTGGGCCAGCCATTCGATGGCTTCGTCGAACATACCAAGCGCGTTTCG CCCACCTGCCTGGTGAACTTCGAGCGCAACCGCTATAGCGTACCGGCGTCGTTTGCCAACCGGCCCGTCAGCCTGCGTGT GTATGCCGCAAAGCTTGTCTTCGTCGCCGAAGGTCAGGTGATCGCCGAGCACGAACGGCGTATCAACCGCAGCCACGACC GCGGCGAGACCATTTACGACTGGCGTCACTACCTGGCAGTCCTGCAGCGCAAACCGGGAGCGCTTCGCAACGGTGCACCC TTCACCGAGTTTCCAACTGGCTTCCGCAAGCTGCAGGGCGTGCTGCTCAAGCGTCCGGGGGGCGACCGGGAGATGGTCGA GATTCTGGCGCTCGTGCTGCTGCACGACGAACAGATTGTGCTCGCTGCCGTCGAGCTGGCATTCGAGGCTGGCGCGCCGA ACAAGCAGACGGTGCTGAACATCCTGAGCCGCCTGCTTGACAGCCCGCCTGTGCCACCGCTGCAGACGCCACAGGCGTTC ACGCTGACCGTCGAGCCGCAGGCCAACGTCGGCCGCTATGACCCGCTAAGAGACCGCGAGGACAATCATGCAGCCTGA Protein sequence : MAILSIIRRWHFRDHVSLREIAKRLGVSRNTVRRYIRAGTVLPAYPERHSPSKLDGFAAKLSGWLKTEANRPRKQRRTLK QIHADLCALGFTGSYDRVAAFARRWRQEQHEQAKTTGRGTFVPPRFAAGEAFQFDWSEDWAVINGERTKLQVAQLKLSHS RAFFLRAYLLQTHEMLFDAHYHAFVAWGCIPRRGIYDNMKTAVDRVRPGKVREVNARFSAMVSHYLFDAEFCNVASGWEK GQIEKNVQDSRHRLWQKAPAFGSLAALNDWLADQCVLLWQQTRHPEHHTTIWDAWAAERPHLMPVGQPFDGFVEHTKRVS PTCLVNFERNRYSVPASFANRPVSLRVYAAKLVFVAEGQVIAEHERRINRSHDRGETIYDWRHYLAVLQRKPGALRNGAP FTEFPTGFRKLQGVLLKRPGGDREMVEILALVLLHDEQIVLAAVELAFEAGAPNKQTVLNILSRLLDSPPVPPLQTPQAF TLTVEPQANVGRYDPLRDREDNHAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 2e-152 | 65 |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 7e-107 | 47 |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 4e-88 | 41 |
