Gene Information

Name : BC1003_5545 (BC1003_5545)
Accession : YP_003910754.1
Strain :
Genome accession: NC_014540
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 2302674 - 2303456 bp
Length : 783 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B1031 putative short-chain alcohol dehydrogenase

DNA sequence :
GTGCTGCTCAAGGATAAGGTGGTGATCGTCACCGGCGGCTCGCGCGGCATCGGGCGCGCGATAGCCGTTGCGTGCGCAAC
CGAAGGCGCGGACGTCGCGATCAACTACTGGGGCGATAACGACGCGTCGTATGGACGCCGCTCGGCCGTCGCGGAAGTGG
TCGGGCAAATCGAGGCGCTCGGGCGGCGCGTGATCGCAATCGAAGGCAACGTTGCCGCGCGCGAAACGGGCCAGCAACTC
GTGCGCGAGACGGTCGCGGCATTCGGCAAGGTGGATGTGCTCGCAAGCAACGCGGGTATTTGTCCGTTCCATGCGTTTCT
CGACATGCCCGCGGACATATTGGAGTCCACCGTCGCGGTGAATCTGAACGGCGCGTTCTATGTCACGCAAGCCGCCGCGC
AGCAGATGAAAGCGCAAGGCACCGGCGGCGCGATCGTTGCGACGAGTTCTATCAGCGCGTTGGTGGGCGGCGGCATGCAG
ACGCACTACACGCCGACCAAGGCCGGCGTTCATTCGCTGATGCAGTCGTGCGCGGTCGCATTGGGGCCGTACGGCATCCG
CTGCAATTCGGTCATGCCGGGCACGATCGCCACAGACCTGAACGCCGAAGATCTCGCGGACGAAGCCAAGAAGGCCTACT
TCGAAAAGCGCATTCCGCTCGGACGCCTCGGCCGTCCGGAAGATGTCGCCGAATGCGTGGTGTTTCTCGCATCGGACCGC
GCGCGCTATGTGACGGGCGCAGCGTTGCTTGTCGACGGCGGCCTGTTCGTCAATCTGCAATGA

Protein sequence :
MLLKDKVVIVTGGSRGIGRAIAVACATEGADVAINYWGDNDASYGRRSAVAEVVGQIEALGRRVIAIEGNVAARETGQQL
VRETVAAFGKVDVLASNAGICPFHAFLDMPADILESTVAVNLNGAFYVTQAAAQQMKAQGTGGAIVATSSISALVGGGMQ
THYTPTKAGVHSLMQSCAVALGPYGIRCNSVMPGTIATDLNAEDLADEAKKAYFEKRIPLGRLGRPEDVAECVVFLASDR
ARYVTGAALLVDGGLFVNLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 2e-29 41
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 2e-28 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 1e-28 41
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 8e-29 41