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Name : BC1003_3639 (BC1003_3639) Accession : YP_003908870.1 Strain : Genome accession: NC_014540 Putative virulence/resistance : Virulence Product : type III secretion protein, HrcV family Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 126142 - 128238 bp Length : 2097 bp Strand : + Note : KEGG: bgl:bglu_2g02370 putative HrpO; TIGRFAM: type III secretion protein, HrcV family; PFAM: type III secretion FHIPEP protein DNA sequence : ATGTTCAAGACACTTAAGCTGCCCGCCGGCGGTGAGATCGGCATTGCGTTGCTGGTGGTCGCCATCATCTCGTTGATGAT CCTGCCGCTGCCGCCGTTTCTGATCGACATTCTGCTTGCCATCAACATCACGATAAGCGTGACGCTGTTGATGGTGACCA TGTATGTGCCGAACGTGGTGTCGCTTTCGGTGTTTCCCTCGCTGCTGCTGTTCACCACGCTGTACCGGCTGTCGCTTAAC ATCGCGTCGACCAAATCCATTCTGCTGCACGCGGATGCGGGCAATATCATCGAGAGTTTCGGCGAACTGGTGGTGGGCGG CAACCTCGTGGTCGGCATGGTCGTGTTCGTGATTATCACGACCGTGCAGTTCATTGTGATCGCGAAAGGCTCGGAACGCG TGGCTGAAGTCGGCGCGCGCTTCACGCTCGACGCGTTGCCCGGCAAGCAAATGAGTATCGACGCGGATCTGCGCGCGAAT CTGCTCACGCCCGAAGAGGCGCGCCGCAAGCGCGCGACGCTCGCCGTCGAAAGCCAGTTGCACGGCGGCATGGACGGCGC GATGAAGTTCGTCAAGGGCGATGCGGTGGCCGGGCTCATCATCACGCTGATCAACATTATCGCGGGCATTGCAGTAGGCG TCGCGTATCACGAGATGTCGGCGGGCGAAGCGGCAAACCGCTTCTCGATTCTCTCGGTCGGCGACGCGATGGTTTCGCAG ATTCCGTCGCTGCTGCTCTCGGTCGCCGCGGGCGTGATGATCACGCGCGTTTCAGACGAACGCGACGCGCGCCCCCTCTC GCTTGGCGACGAGATTGGCCGGCAGTTGTCCGCAAGCGCCCGCGCACTTTACTTCGCGAGCTTGCTGCTGCTCGGCTTCG CCGCCGTGCCGGGCTTTCCGAGCGCACTGTTCCTGCTGCTCGCGGCGATCCTCGCGTTCTGCGGATACCGCCTCGGCAAG AGCAAACCCGCGGCGACCACGCATGCCGGCGAAGCCGTCAACGCAATGCAGCGCGCCGGCTCCAAGGCCGAGACACCGGC CATTCTCACGCGTGCGCCGCAATTCACCTGTCCGCTCGGCGTGCGTATTTCGCCCGACCTGGTCCCGCGTCTGTCTACCA GCGCGCTCGACCGCTCGTTTGAAACGGAGCGCGCACGTCTGCAGGAATATCTCGGCTTACCGTTTCCCGGCATCACCATG TGGACGAGCGACGCGCTCCCCGCGTCGAGCTGCGAACTGCTGATGCACGACGTGCCGTACTGCACGATCGAACTGCCGCC TGGCAAGGTGATGCTGCCCAACCCGGCGCTCACCGGCTCGCACGACGCGGCTCGCGCCGACGCAGAAACGCTCGCCGCGC ACGGCGACCCGCGCGCGGAAAAACGCCGGGGACTCGACGGCGGCCCGGGACCCACGTGGTGGCTCGACGAAAAGAGCCTG CCGCCCAAACAATCGGCGTGGCGCGCGGAACAGGTGATTGCGCATGCGTCGGTAGCCATGCTGCGCAAGCACGCATCGCT CTTTCTCGGCATTCAGGAGGTGCAATGGATACTCGATCAGCAGAATGCCGAATATCCGGGCCTTGTCGCCGAGGTGCAGA AAGTCCTGCCGCCGCAGCGTATTGCCGACGTGCTGCGGCGCCTGCTCGAAGAGCAGATTCCGATCCGTAACGTGCGCAAT ATTCTGGAGAGCCTGGTGGTTTGGGGCGCGAAGGAAAAGGACATGCTCATGCTGACCGAATATGTGCGCGGCGATCTCGC GCGCTTTCTCGCGCATCGCGCGGCGGGCGCGGGTCGGCAATTGCCCGCGGTGCTGTTCGATCTGCCGGTTGAACAGCACA TCCGTCAGGCGATCAAGCAGACGCCGACCGGCAATTTTCTTGCGTTGCCGCCGGACGAAGTGGGCTTTCTGATCGACCGC ATTCAGTCTTTTGTCGGCGATACGCCGCGTGACGGCGTCGCGCTCGTCACGTCGATGGATATTCGCCGTTACGTGCGCCG TATGATCGAGGCGCGCCTTGGCTGGCTCGCCGTCTACTCGTATCAGGAACTGGGCGAGCACGTCGAGTTGCAGCCGCTTG GCCGCGTGACGATCTAG Protein sequence : MFKTLKLPAGGEIGIALLVVAIISLMILPLPPFLIDILLAINITISVTLLMVTMYVPNVVSLSVFPSLLLFTTLYRLSLN IASTKSILLHADAGNIIESFGELVVGGNLVVGMVVFVIITTVQFIVIAKGSERVAEVGARFTLDALPGKQMSIDADLRAN LLTPEEARRKRATLAVESQLHGGMDGAMKFVKGDAVAGLIITLINIIAGIAVGVAYHEMSAGEAANRFSILSVGDAMVSQ IPSLLLSVAAGVMITRVSDERDARPLSLGDEIGRQLSASARALYFASLLLLGFAAVPGFPSALFLLLAAILAFCGYRLGK SKPAATTHAGEAVNAMQRAGSKAETPAILTRAPQFTCPLGVRISPDLVPRLSTSALDRSFETERARLQEYLGLPFPGITM WTSDALPASSCELLMHDVPYCTIELPPGKVMLPNPALTGSHDAARADAETLAAHGDPRAEKRRGLDGGPGPTWWLDEKSL PPKQSAWRAEQVIAHASVAMLRKHASLFLGIQEVQWILDQQNAEYPGLVAEVQKVLPPQRIADVLRRLLEEQIPIRNVRN ILESLVVWGAKEKDMLMLTEYVRGDLARFLAHRAAGAGRQLPAVLFDLPVEQHIRQAIKQTPTGNFLALPPDEVGFLIDR IQSFVGDTPRDGVALVTSMDIRRYVRRMIEARLGWLAVYSYQELGEHVELQPLGRVTI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 2e-85 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BC1003_3639 | YP_003908870.1 | type III secretion protein, HrcV family | VFG0064 | Protein | 2e-85 | 42 |
| BC1003_3639 | YP_003908870.1 | type III secretion protein, HrcV family | VFG0198 | Protein | 3e-82 | 42 |
| BC1003_3639 | YP_003908870.1 | type III secretion protein, HrcV family | VFG0384 | Protein | 1e-83 | 42 |
