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Name : BC1003_3629 (BC1003_3629) Accession : YP_003908861.1 Strain : Genome accession: NC_014540 Putative virulence/resistance : Virulence Product : type III secretion outer membrane pore, YscC/HrcC family Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 115589 - 117421 bp Length : 1833 bp Strand : - Note : KEGG: bpd:BURPS668_A1985 YscC/HrcC family type III secretion outer membrane protein; TIGRFAM: type III secretion outer membrane pore, YscC/HrcC family; PFAM: type II and III secretion system protein; NolW domain protein DNA sequence : ATGAACAACAAACGGCTCATGCTTGCTGCCCGGCTGGCAGCGTCTCTTGCCTTCGCATTGCCCGCTCTGCTCGCGTCGCC CGCCGAAGCCGCGGCCATTCACTGGCGCAGCTCGGTGGTTCACGTCAGCGCCGAAGGGCAGGACGTGAAGGACGTGCTGC GCGATTTCACCGCTGGACAAGGTGTGCCCACAACCATTTCGGGCGACGTGCACGGCAGCGTGAGCGGCCGCTTCGACATG CCGCCGCAGCGCTTTCTCGACACGCTGGCGTCGAGCTTCGGCTTCGTGTGGTTTTACGACGGCAGCGTGCTGTCCATCAG CGACGTCAACACCGTCACGCGGCGCGTGATCAAGCTCGATCATGCGAGTGCCGCCGACCTGCGTTCGGCGCTCACGCAAC TGCGCATCGAGAATGCGCGCTTTCCGATCACCTACGACGAGACCCAGGGAACCGCGCTCGTCAGCGGGCCACAAGCGTAC GTGCAGCTCGTGTCCGAGGTCGCGCGCCGTCTCGATGACAACGCCGCGCAGCGTTCGGGTTCGATGATCCGCGTGTTCCA GCTGCATCACGCGTGGGCTGCGGATCACAACGTCGAGATAGACGGCAAGACGGTGACGGTGTCGGGCGTCGCAAACGTGC TGTCGGCCATGTACCATCCGCGCGATCAGCGTGGCCGTAACGGCGCCGACAGCTACGAGCAGGCCGCCAACCGCGCCGCG CGCGAACCGACAATGCGCCGCCTGCAGCCGATGCGCGACGTGACCGGCAGCACCGACGGCGGCGGTTATCAGAGCGGCGT GAATCCGCCGCTGCCGGCCGGCATTGCCGCGAACGGCGGCGTGGCGCCCGGCATCGGCGGATTGCTCAACGGCATGGCGG CGGGCGGTGGACCAGGCATGCAGTCGATTGGCTCCTCCAGTAGCGGCGACGGCGACAGCGCTGCCGATACGTCGGTGAGC GGCAGCCAGACACTGCCGGTGATCGAAGCCGATCCGCGCACCAACTCCGTGTTGATTCGCGACGTGCCGCAACGCCTCGC GCAATACCAGAGCCTGATCGACAAACTCGACGTGCGGCCGCGCCTGATCGAGATCGAAGCGCATATCATCGAAATCGACG ACAACGCGCTCAAGCAGATTGGCGTGGACTGGCGCGCGCACAACAGCCACATCGACATCCAGACGGGCAACGGCACCACG CAGCAAAACGGCTATAACGGCAACATCGATCCGATTTTCGGCACGCAGACGCTTGCGGACGGCACGACCGTCATCAACAC GACGCCGGTCGGCGGCTCGCTCACAGCCGTGCTCGGCAACGCGGGCCGCTATCTGCTCGCGCGCGTGAACGCGCTGCAAC AGAGCAATCTCGCGAAGATCGACGCGAGCCCGAAAGTCGCCACGCTCAACAACGTGGAGGCCGTGATGGACCAGAAAACG CGCTTTTTCGTGCGCGTGTCGGGCTACACGTCGGCGGATCTGTACAGCGTGTCGACCGGCGTGTCGCTGCGCGTGCTGCC GCTCGTGGTCGAAGAGAACGGCAGAACGGACATCAAGCTGAACGTTCATATCGAGGACGGCGCAATCACATCGCAGCAGG TGGACAACATTCCAGTCATCACGACGAGCACGATCAATACCGAATCGTTCGTCGGCCAGGGCGAGAGCCTGCTGATTGCC GGCTATCGTGTCGATACGTCGACGAACGGCGAAACCGGCGTGCCGGGTCTCTCGAAGATTCCGCTGATCGGCGCGCTGTT CCGCTATCGCGACGATCAGCGCAGCCATATGGAGCGGCTCTTTCTGCTGTCGCCGCGCATTATCGAGTTCTGA Protein sequence : MNNKRLMLAARLAASLAFALPALLASPAEAAAIHWRSSVVHVSAEGQDVKDVLRDFTAGQGVPTTISGDVHGSVSGRFDM PPQRFLDTLASSFGFVWFYDGSVLSISDVNTVTRRVIKLDHASAADLRSALTQLRIENARFPITYDETQGTALVSGPQAY VQLVSEVARRLDDNAAQRSGSMIRVFQLHHAWAADHNVEIDGKTVTVSGVANVLSAMYHPRDQRGRNGADSYEQAANRAA REPTMRRLQPMRDVTGSTDGGGYQSGVNPPLPAGIAANGGVAPGIGGLLNGMAAGGGPGMQSIGSSSSGDGDSAADTSVS GSQTLPVIEADPRTNSVLIRDVPQRLAQYQSLIDKLDVRPRLIEIEAHIIEIDDNALKQIGVDWRAHNSHIDIQTGNGTT QQNGYNGNIDPIFGTQTLADGTTVINTTPVGGSLTAVLGNAGRYLLARVNALQQSNLAKIDASPKVATLNNVEAVMDQKT RFFVRVSGYTSADLYSVSTGVSLRVLPLVVEENGRTDIKLNVHIEDGAITSQQVDNIPVITTSTINTESFVGQGESLLIA GYRVDTSTNGETGVPGLSKIPLIGALFRYRDDQRSHMERLFLLSPRIIEF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3003 | YP_244071.1 | HrcC protein | Virulence | Hrp PAI | Protein | 4e-99 | 43 |
| hrcC | NP_636613.1 | HrcC protein | Virulence | Hrp PAI | Protein | 4e-99 | 43 |
