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Name : BC1003_0777 (BC1003_0777) Accession : YP_003906057.1 Strain : Genome accession: NC_014539 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 884601 - 886505 bp Length : 1905 bp Strand : + Note : PFAM: polysaccharide biosynthesis protein CapD; CoA-binding domain protein; KEGG: bxe:Bxe_A3780 putative epimerase/dehydratase polysaccharide-related biosynthesis protein DNA sequence : ATGTTAAGAAACAAGGCCGCCTGGCTGTCTTTCAGCGCGTTCCTTTTCGATCTGTGCGCAGTTGCCGGATCGTGGCTTGT CGCGTATCTGCTCCGTTTTAACGGATCAATTCCGGACGACTTCCGTGCCGGCGCCGTGCGTTCCCTGCTGTGGATACTTC CGGTCTACGGCGTGATGTTTCGTATTTTCGGGCTTTACCGCGGCATGTGGGTATTTGCCAGCTTGCCCGATCTCGTTCGG ATCTCAAAAGCCGTGATCGCCGGGGCGCTCGTTGCCATGGTTGTCTCGGTATTGGTGCAACCTTCGCCCATCGTCCCGCG CTCGGTCCTCGTCGTGTCGCCGCTCTTCCTGTTCCTGGCCATGGGCGGATCGCGGGCGCTGTACCGGGCGACCAAAGAGT TCTATCTTTACGGCGGCCTCGTCGCCCAAGGCAAGCCGGTCGTCGTGCTCGGCGCGGGCAACGCCGGTGCGAGCCTAGCG CGTGAGTTGTCGCGCTCGAGCGAATGGCGTCTGGTCGGCCTGCTGGACGACGATGTGTCCAAGCACGGACGCGAAATCTA CGGTTACAAGGTTCTCGGTTCTATCAGCGAATTGCCGCGCATGGCCGAGGAGCTCAAAACCGAATACGCGATCATCGCCA TCCCTTCGGCATCGGTGGATGTCCAGCGTCGGGTTGCCACGCTGTGTGTGCGCGCCGGCGTGCGCGCGCTCGTGCTGCCG GCATTGACCGATGTCAGCCAAGGCCAAGCCTTCCTCTCCCGCGTCCGCCAGATCGACCTCGAAGATCTATTGGGCCGCGA CCCCGTCATGATTGACACCGACCACGTTGAAGCGCTCCTCAAAAACCGCGTCGTCATGGTTACGGGCGCGGGCGGCTCGA TCGGCTCGGAGCTTTGCCGGCAGATCCTGCGCTTCGGCCCAGTTCAGCTGGTGGCGTTCGACATCTCCGAGTTTTCCATC TACCGGCTCAATGAAGAGCTGTCCGACAAGTATCCGGAGGTCTCCGTGGTGCCGATCATCGGCGACGTGAAGGACTCGCT GCTACTTGATCAGGTTATGGCGCGCTACACGCCGCACATCGTTTTTCACGCGGCGGCCTACAAGCACGTGCCGCTCATGG AAGAAGTGAATGCGTGGCAGGCCGTGCGCAACAACGTGCTCGGCACGTATCGCGTGGCGCGTGCCGCGATTCGTCACGAC GTCGCGCATTTCGTGCTGATTTCGACCGACAAGGCCGTCAACCCCACCAACGTGATGGGCGCCAGCAAGCGTCTCGCCGA AATGGTGTGCTCTTCGCTGCAGCAGCAGGGCACGCGGCGCACGCAGTTCGAGACCGTGCGCTTTGGCAACGTTCTCGGCA GCGCGGGCAGCGTGATTCCGAAATTCCAGGAGCAGATCGCGCGCGGTGGTCCCGTCACGGTCACCCATCCCGAAATCACG CGTTTCTTCATGACGATTCCCGAAGCGTCGCAGCTCGTGCTGCAAGCGTCGAGCATGGGGCACGGCGGAGAGATCTTTAT TCTCGACATGGGCAAGCCTGTGCGCATTGCCGATCTTGCGCACGATCTGATTCGCCTTTACGGCTTTACTGACGAGCAGA TTCGTGTGGTATTCACGGGGCTGCGTCCGGGCGAAAAGCTCTACGAGGAACTGCTGGCCGACGACGAAACCACGACGCGC ACGCCGCATCCGAAGCTGCGTATCGCAAGGGCCCGGGAAGTGCCCGACAGCTTGATCGACAACCTTCTGCCGTGGCTCAT GCAACATCGCATTCCCACCGACGACGAAGTCCGCCGCGATCTGCGCCGTTGGGTTGCCGAGTATCAGCCAGCGACGTCAA CCGCACTGCGAAGCGTGGCCTGCGCGCGTAACGCAGATCTCGTGGTTGCCTCGCGGTCGCAATGA Protein sequence : MLRNKAAWLSFSAFLFDLCAVAGSWLVAYLLRFNGSIPDDFRAGAVRSLLWILPVYGVMFRIFGLYRGMWVFASLPDLVR ISKAVIAGALVAMVVSVLVQPSPIVPRSVLVVSPLFLFLAMGGSRALYRATKEFYLYGGLVAQGKPVVVLGAGNAGASLA RELSRSSEWRLVGLLDDDVSKHGREIYGYKVLGSISELPRMAEELKTEYAIIAIPSASVDVQRRVATLCVRAGVRALVLP ALTDVSQGQAFLSRVRQIDLEDLLGRDPVMIDTDHVEALLKNRVVMVTGAGGSIGSELCRQILRFGPVQLVAFDISEFSI YRLNEELSDKYPEVSVVPIIGDVKDSLLLDQVMARYTPHIVFHAAAYKHVPLMEEVNAWQAVRNNVLGTYRVARAAIRHD VAHFVLISTDKAVNPTNVMGASKRLAEMVCSSLQQQGTRRTQFETVRFGNVLGSAGSVIPKFQEQIARGGPVTVTHPEIT RFFMTIPEASQLVLQASSMGHGGEIFILDMGKPVRIADLAHDLIRLYGFTDEQIRVVFTGLRPGEKLYEELLADDETTTR TPHPKLRIARAREVPDSLIDNLLPWLMQHRIPTDDEVRRDLRRWVAEYQPATSTALRSVACARNADLVVASRSQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 7e-90 | 45 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 3e-91 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BC1003_0777 | YP_003906057.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 7e-91 | 49 |
| BC1003_0777 | YP_003906057.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 2e-80 | 46 |
