Gene Information

Name : BC1003_0631 (BC1003_0631)
Accession : YP_003905921.1
Strain :
Genome accession: NC_014539
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 722194 - 722868 bp
Length : 675 bp
Strand : -
Note : KEGG: bph:Bphy_6335 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence :

ATGCGGATATTGCTCATCGAAGACGATCTCTTGCTAGGCGATGGCATTCGTGCCGGCCTTCGACAGGCGGGCTTCCAGGT
CGACTGGGTGCGTGACGGCAACGCCGCCGAGGCCGAGTTGCGTAGCGACGTATATGCCGCGGCCGTCCTGGATCTCGGGC
TGCCGAGGAAGGATGGGATTGAAGTCCTATCGTCCATACGCCGTGCGGGCATAACTCTGCCGGTGCTCGTGTTGACCGCA
CGCGACACCGTTCCAGACCGTGTCCGCGGACTTGACATCGGCGCAGACGATTACGTCGTCAAGCCCGTTGACCTGCAGGA
ACTCGCCGCTCGGCTGCGGGCACTGGTGCGTCGCGCACACGGTGTATCTCAGGAAACCCTGCGCGTGCAAAACGTCGCCC
TCGAACCCGCGACGCGATCTGTCTACAGGAATGAAGAGCCAGTAACGCTTTCATCACGCGAGTTTGATTTGTTGCAGACT
CTCATGCTGAACGCGGGCCGGGTGCTGTCTCGTGAGCAACTCGAACAAGCCATCTACGGTTGGGGACAGGAGATCGAGAG
CAACGCAGTAGAAGTGCATATTCATCGGCTTCGCACCAAGCTCGGCAGCGACCTGATCAAGACAGTTCGTGGCGTCGGCT
ATGTTTTGATGCTCGAGGGCTCAGCCAGGCAATGA

Protein sequence :

MRILLIEDDLLLGDGIRAGLRQAGFQVDWVRDGNAAEAELRSDVYAAAVLDLGLPRKDGIEVLSSIRRAGITLPVLVLTA
RDTVPDRVRGLDIGADDYVVKPVDLQELAARLRALVRRAHGVSQETLRVQNVALEPATRSVYRNEEPVTLSSREFDLLQT
LMLNAGRVLSREQLEQAIYGWGQEIESNAVEVHIHRLRTKLGSDLIKTVRGVGYVLMLEGSARQ

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
armR	AAN62112.1	putative response-regulator ArmR	Not tested	PAGI-2(C)	Protein	7e-31	50
copR	NP_460069.2	transcriptional regulatory protein YedW	Not tested	SPI-5	Protein	2e-22	41

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
BC1003_0631	YP_003905921.1	winged helix family two component transcriptional regulator	BAC0487	Protein	4e-35	48
BC1003_0631	YP_003905921.1	winged helix family two component transcriptional regulator	BAC0197	Protein	9e-30	44
BC1003_0631	YP_003905921.1	winged helix family two component transcriptional regulator	HE999704.1.gene1528.	Protein	8e-23	44
BC1003_0631	YP_003905921.1	winged helix family two component transcriptional regulator	BAC0083	Protein	4e-27	42
BC1003_0631	YP_003905921.1	winged helix family two component transcriptional regulator	NC_002516.2.879194.p	Protein	2e-21	42
BC1003_0631	YP_003905921.1	winged helix family two component transcriptional regulator	BAC0125	Protein	5e-26	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
BC1003_0631	YP_003905921.1	winged helix family two component transcriptional regulator	VFG0473	Protein	1e-36	49
BC1003_0631	YP_003905921.1	winged helix family two component transcriptional regulator	VFG1390	Protein	3e-26	43
BC1003_0631	YP_003905921.1	winged helix family two component transcriptional regulator	VFG1389	Protein	2e-21	42
BC1003_0631	YP_003905921.1	winged helix family two component transcriptional regulator	VFG0596	Protein	6e-23	41