Gene Information

Name : BC1003_0047 (BC1003_0047)
Accession : YP_003905346.1
Strain :
Genome accession: NC_014539
Putative virulence/resistance : Resistance
Product : heavy metal translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 53730 - 56072 bp
Length : 2343 bp
Strand : +
Note : KEGG: bxe:Bxe_A4439 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associate

DNA sequence :
ATGCAGCGCGCGCACGAGCCGAACGCCGACCCCACTGAAGAACCGCAAACCCGCGTCCGAGGGCATGAGCATGGGCCCGA
GCACGCGCATGAAGCCCATGCAGGCGACTCCGCATGCGGCAGTTGCTGCGGCGCGGCCAGTCATGCTCCGCTGCCGCTGC
GCGCGGTTGTACCGCCGTCCGAAGCAGTGCAAGGCGACGTGCGCACGGCCATGCGCATCATGCAGATGGACTGCCCAACC
GAAGAAGCGCTGATTCGCAAGAAATTCAGCCGTATGTCCGAGGTGCGCAGCATGGAGTTCAATCTCATGCAGCGCGTGCT
GACGGTCGTGCATGCGCCCGACGCGCTCGACTCGATTCTCGTTGCGCTGCGGTCGCTGGACTTCACGCCCGAACTCGCGG
ATGCCGAGTCGCAACGCCCGCGCGGCGCCGCTCAGCACGCGTCCTCCGCTCAGCCCGCGCCGCGCAGGTGGTGGCCGCTT
GCCTTCGCGGGCGTCGCTGCGGCCGCTTCAGAGGCCGCTGGCTGGGCAGGCGCGCCTGCGTGGGTGGCAGCCGGTCTTGC
GCTCGTCGCGATCGCCTCATGCGGCCTTTCAACCTATCGCAAGGGCTGGCTCGCCATTCGCCACGGCAATCTCAACATCA
ACGCGTTGATGAGCATCGCGGTGAGCGGCGCGTTGATACTCGGTCAATGGCCCGAGGCAGCCATGGTGATGGTGCTCTTC
ACGGTCGCGGAATTGATCGAGGCGAGGTCGCTCGACCGCGCGCGCAACGCGATTCAGGGTTTGATGCAACTCACGCCCGA
ACAGGCGAGCGTGCAGCAGCCCGACGGCGGCTGGCAGCTCACGCGCCTCGAGGTGATCGCACCCGGCGCGCTGGTTCGCG
TGAAGCCGGGCGAGCGGATCGCGCTCGATGGTGAGATCGTTGCGGGACGCTCCAGTGTCGATCAGGCCCCGATCACCGGA
GAAAGCCTGCCGGTCGACAAGACCGTGGGCGACGCTGTGTTCGCCGGCACCGTCAACCAGGCGGGGTCGTTCGATTACCG
CGTGACGGCCGCGGCCAGCAACACCACGCTCGCGCGCATCATTCATGCGGTCGAAGCGGCACAAGGCAGCAAAGCGCCCA
CGCAACGTTTCGTCGATCAGTTTGCGCGTGTGTATACGCCGCTGGTGTTCGCCGTCGCACTGGCGGTCGCGCTCGTGCCG
CCGCTCATTTTCGGTGGAATGTGGCAGGCGTGGATCTACAAGGCGCTGGTGATGCTGGTGATTGCGTGTCCATGCGCGCT
CGCTATCTCGACGCCTGTCACGATCGTCAGCGGTCTCGCGGCAGCTGCGCGCAAGGGAATTCTCATCAAGGGCGGCGCCT
ACCTCGAACAGGGCCGCAAGCTGCGCCGCCTTGCGTTCGACAAAACCGGCACGATCACGCACGGCAAGCCCGTGCAAACC
GATTTCGCCGTGCTCGCCAAAGCAGACTCGAATACAGATGCTGACGCGGACACCGACGCCGCCCGTTGCCGCACGCTCGC
CGCGAGTCTCGCGGCACGCTCGGACCACCCCGTGTCAATGGCAATTGCAAGCGCCGCGCAAAAGGATGGCATCGCAAGCG
TCATGGTCGATTCATTCGAAGCGCTCGCCGGACGCGGCGTGCGTGGCGTGATAAACGGCCTCACGTACTGGCTCGGCAAT
CATCGGCTTGCGGAAGAACTGGGGCTATGTTCGCCGTCACTCGAAGCACGGCTCGACGCGCTCGAGCGTCAGGGCAAAAC
CGTCGTGCTGCTGAGCGACGCGCAACGTGTGCTCGCGCTCTTCGCTGTCGCCGATACGGTCAAGGAAACCAGCCGCGCGG
CTATCGCCGAACTGCATCGCGCAGGCGTAACCACGGCCATGCTCACCGGCGATAATCCGCACACCGCTGCGGCGATTGCC
GCGCAAGTCGGTATCGACGAAGCGCGCGGCAACCAGTTGCCGCAAGACAAGCTGGACGCCGTCGCGCAGTGGTCGGCCGA
GGGTGCGACCGTGGGCATGGTCGGCGACGGCATTAACGACGCGCCTGCGCTCGCGCGCGCCGACATTGGCTTTGCGATGG
GCGCAATGGGCACCGGCACCGCGATAGAAACCGCCGACGTCGCGTTGATGGACGACGACCTGCGCAAGATTCCGCTCTTC
ATCCGCCTCTCGCAAGCGACGCATGCCGTACTGGTGCAGAACATTGCGTTGGCGCTCGGCATCAAGAGCGTCTTTCTGGT
GTTGACGGTGATGGGTCTGGGCACGATGTGGATGGCCGTGTTCGCCGACGTCGGGGCGAGCCTGGTGGTGGTCGCGAACG
GCTTGCGGTTGCTGCGCAAATGA

Protein sequence :
MQRAHEPNADPTEEPQTRVRGHEHGPEHAHEAHAGDSACGSCCGAASHAPLPLRAVVPPSEAVQGDVRTAMRIMQMDCPT
EEALIRKKFSRMSEVRSMEFNLMQRVLTVVHAPDALDSILVALRSLDFTPELADAESQRPRGAAQHASSAQPAPRRWWPL
AFAGVAAAASEAAGWAGAPAWVAAGLALVAIASCGLSTYRKGWLAIRHGNLNINALMSIAVSGALILGQWPEAAMVMVLF
TVAELIEARSLDRARNAIQGLMQLTPEQASVQQPDGGWQLTRLEVIAPGALVRVKPGERIALDGEIVAGRSSVDQAPITG
ESLPVDKTVGDAVFAGTVNQAGSFDYRVTAAASNTTLARIIHAVEAAQGSKAPTQRFVDQFARVYTPLVFAVALAVALVP
PLIFGGMWQAWIYKALVMLVIACPCALAISTPVTIVSGLAAAARKGILIKGGAYLEQGRKLRRLAFDKTGTITHGKPVQT
DFAVLAKADSNTDADADTDAARCRTLAASLAARSDHPVSMAIASAAQKDGIASVMVDSFEALAGRGVRGVINGLTYWLGN
HRLAEELGLCSPSLEARLDALERQGKTVVLLSDAQRVLALFAVADTVKETSRAAIAELHRAGVTTAMLTGDNPHTAAAIA
AQVGIDEARGNQLPQDKLDAVAQWSAEGATVGMVGDGINDAPALARADIGFAMGAMGTGTAIETADVALMDDDLRKIPLF
IRLSQATHAVLVQNIALALGIKSVFLVLTVMGLGTMWMAVFADVGASLVVVANGLRLLRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 3e-118 47
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 3e-118 47
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 1e-117 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1003_0047 YP_003905346.1 heavy metal translocating P-type ATPase BAC0298 Protein 0.0 71
BC1003_0047 YP_003905346.1 heavy metal translocating P-type ATPase BAC0461 Protein 8e-81 42