Gene Information

Name : BC1003_3332 (BC1003_3332)
Accession : YP_003908569.1
Strain :
Genome accession: NC_014539
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 3858266 - 3859996 bp
Length : 1731 bp
Strand : +
Note : TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; KEGG: bpy:Bphyt_3773 flagellar protein export ATPase FliI; SMART: AAA ATPase

DNA sequence :
ATGGTGAAGCCGACCCTCGAGGAAATCCGCGCAAGCGACCTGACGCCGCTCGAACGCGAGCTGGCGCTGGCATCGTTCGG
CGCGCAGGCGCCCGCGGATACGCTGTTCGCCGACGCGCCGGCGGCCTCGGCCGCCTCGGCCACTGACCCGGCGGACGCGG
CGAGCGTGCCGGACCTGACGGACTTGACCGACCTGACGCACGTGCCAGCGGGGAGCCACGCTCACCCGCTGACCGGCGCG
GCCGCAAGCCGCGAGTCGGCACCCGCAGCCCAAACCGGCGCCGGCACGCCGGGCGCCGCGCGCGCCGCGTCCCGCGCACC
GGCGGCCGCGCCCTACGATCCGAAGCTTGACAGCAATCCGCACGTGCAGGCCTGGCGCGGCCAGCTCGACGCCCTGCGCG
CGCGCAACGCAATCGCCAAGCCGATGCGCGCGTGCGGACGCCTGACGCGCGCCGCGGGTCTCGTGCTCGAAGCGGTCGGG
CTGCGCCTTTCGGTCGGCGCCGAAGTGATGATCGAGCTGCCGCCCGGCAGCTCCTTGCCGATGGCCGAAGCCGAAGTTGT
CGGCTTTTCCGGCGACAGACTGTTCCTGATGCCGACCACCGAAGTGATCGGCCTTTTGCCCGGCGCGCGGGTCTTTCCGC
TCGAGAGCGCGCCCATCGCCGACCCGATGGCGGGCGCGAAGCGCCTGCCGGTCGGCTGGGAACTGCTCGGCCGCGTGCTC
GACGCGTCCGGCCGGCCGCTCGACGGTCTCGGCCCGCTCGGCGCGCATGCCGATGCGCCGCTTTCCGCACCGGTCATCAA
TCCGCTGAACCGCGAGCCGATCCACAAGGTGCTCGACGTCGGCGTGCGCGCGATCAACGCGCTGCTGACGGTCGGACGCG
GGCAGCGCATGGGCCTCTTCGCCGGCTCGGGCGTGGGTAAGTCGGTGCTGCTCGGCACGATGGCGCGTTACACCAGCGCC
GAAGTGATCGTGATCGGTCTGATCGGCGAACGCGGCCGCGAAGTGAAGGAGTTCATCGAACAGATTCTCGGCGAGGAAGG
TCTCGCGCGCTCCGTCGTGATCGCGGCTCCTGCCGACGTTTCGCCGCTTCTGCGAATGCAGGCAGCCGCCTACTCGACCT
CGCTCGCCGAATACTTCCGCGACCAGGGCAAGCACGTGCTGCTGCTAATGGATTCGCTCACCCGTTACGCGATGGCGCAG
CGCGAGATCGCGCTTGCCGTGGGCGAGCCGCCCGCGACCAAGGGCTATCCGCCGTCGGTGTTCGCCAAGCTGCCCGCGCT
CGTCGAGCGCACCGGCAACGGCCCTGCGGGCGGCGGCTCGATCACTGCGTTCTATACGGTGCTGACCGAAGGCGACGACC
AGCAGGACCCCATCGCCGACTCGGCGCGCGCGATTCTCGACGGTCACATCGTGCTGTCGCGCTCGCTCGCGGAAGCCGGC
CACTATCCGGCGATCGACATCGAAGCGTCGATTAGCCGGGCAATGACCGCGCTGATCGACGATAACCATCTGGACAAAAC
GCGTATGTTCAAGCAGATGCTGTCGCGCTACCAGCGCAACCGCGATCTGATCAACGTGGGCGCTTACTCCAGCGGGCGCG
ACGCGCTGCTCGACCGCGCCATCGCGCTGTATCCGCGGATGGAAGCCTTCCTGCAGCAAGGCTTTCGCGAATGCGCGAAT
TTTGAACCGAGTATCGAGATGCTGGACGCGCTGTTTGCCCAGGGAGGCTGA

Protein sequence :
MVKPTLEEIRASDLTPLERELALASFGAQAPADTLFADAPAASAASATDPADAASVPDLTDLTDLTHVPAGSHAHPLTGA
AASRESAPAAQTGAGTPGAARAASRAPAAAPYDPKLDSNPHVQAWRGQLDALRARNAIAKPMRACGRLTRAAGLVLEAVG
LRLSVGAEVMIELPPGSSLPMAEAEVVGFSGDRLFLMPTTEVIGLLPGARVFPLESAPIADPMAGAKRLPVGWELLGRVL
DASGRPLDGLGPLGAHADAPLSAPVINPLNREPIHKVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGTMARYTSA
EVIVIGLIGERGREVKEFIEQILGEEGLARSVVIAAPADVSPLLRMQAAAYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQ
REIALAVGEPPATKGYPPSVFAKLPALVERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRSLAEAG
HYPAIDIEASISRAMTALIDDNHLDKTRMFKQMLSRYQRNRDLINVGAYSSGRDALLDRAIALYPRMEAFLQQGFRECAN
FEPSIEMLDALFAQGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 5e-81 47
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 3e-81 47
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 9e-82 47
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-80 47
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 9e-82 47
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-81 47
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-81 47
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-80 46
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-80 46
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-77 46
unnamed AAL06369.1 EscN Virulence LEE Protein 6e-73 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 1e-66 43
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 4e-66 42
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 4e-67 42
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 3e-67 42
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-69 42
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-67 42
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 9e-66 41
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 9e-67 41
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 3e-67 41
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1003_3332 YP_003908569.1 flagellar protein export ATPase FliI VFG2499 Protein 0.0 86
BC1003_3332 YP_003908569.1 flagellar protein export ATPase FliI VFG2331 Protein 4e-145 70
BC1003_3332 YP_003908569.1 flagellar protein export ATPase FliI VFG1254 Protein 2e-125 63
BC1003_3332 YP_003908569.1 flagellar protein export ATPase FliI VFG0192 Protein 1e-83 47
BC1003_3332 YP_003908569.1 flagellar protein export ATPase FliI VFG0048 Protein 2e-80 47
BC1003_3332 YP_003908569.1 flagellar protein export ATPase FliI VFG2144 Protein 5e-80 46
BC1003_3332 YP_003908569.1 flagellar protein export ATPase FliI VFG0390 Protein 2e-78 45
BC1003_3332 YP_003908569.1 flagellar protein export ATPase FliI VFG2459 Protein 2e-62 41