|
Name : BC1003_3038 (BC1003_3038) Accession : YP_003908278.1 Strain : Genome accession: NC_014539 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3540193 - 3541485 bp Length : 1293 bp Strand : + Note : PFAM: type II secretion system protein E; KEGG: bxe:Bxe_A0504 type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB DNA sequence : ATGCAACCTCATATCCAGCCTGCCGCCCTGCTGCGGCCGCTGTCACCCGACGGCGAAAGCGCCTCGCGCACCAAGCCCGG CGCGTTTGCCGCCGATGCAGGCGCGGCAACGCTCAACGATCCGGACAGTGCGCCCGCCGTACGTCTTCTGACTGACACGC TGCGGGAAGCGACGCGCCGCAACGCGTCTGATCTTCATATCGAGCCGGCCGAGAACAGCTGGCGCGTGCGCCTGCGTATC GACGGCGTGTTGCATGAGATGGCACAGCCCCCGGCGCATTTGCGCGACGCGTTCATCACACGCGTGAAGGTTCTCGCGCG CATGGACATTGCCGAGCGTCGTGTGCCACAAGACGGCCGGCTGCGCATCGCCACGTCGCCTGGCCGAGTGGAGGACTACC GCGTCAACTCGCTGCCCACGCTGTTCGGAGAAAAGCTCGTGCTGCGCCGGCTCGACGCATTGCCCGCCGATCTTTCCCTC GACTCTCTCGGCCTCGACGCGCAGCAGCGCGAAGCTCTGGACTCGGCGATCCGCGCGCCTCATGGTCTCGTGCTTGTCAC GGGGCCGACGGGTAGCGGCAAGACGCTTTCGTTGTACTGCTTTCTGAACCTGCTCAACAGTGAGGCGCGCAATCTGTGTT CCGTGGAAGACCCTGCGGAGATTCAGTTGGCCGGCATCAATCAGGTGAGCGTGCGCGAGAAGGCCGGGCTGACGTTTGCG GTAGCGCTGCGTGCGTTTCTGCGTCAGGACCCGGACGTCATCATGGTGGGCGAGATTCGCGACGAAGAGACGGCAGACGT GGCCGTCAAGGCCGCGCAAACCGGCCACCTCGTTCTCTCGACGCTGCACACGAACGACGCGCCGGCTGCCGTGGCGCGTC TGATCGACATCGGCGTCGCACCGTACAACCTGGCTGCTGCGCTGCGCATGGTCACCGCTCAACGGCTGGTGCGCCGCCTC TGCGCGGCGTGCCGTGCTCCTGCACCGCAGTCGGCGGCGGCGCTTCGTGCTGCAGGTTTCGCCGAAGCTGAGCTCGCCGG TTGGCAACCGTTCGCGCCGACGGGCTGCGCGGCCTGCCACGGTATCGGCTATCGGGGTCGCGTCGGCGTACATCAGGTCA TGCCGGTCTCGGATGCCATGCGTGAACTGATCGTCGCGCGCGCGAGTACGCAGGAACTCGCACGGCAGGCGCATAGCGAA GGGGTCGGCACGCTGCGGGACGCGGCCTTGGCTCTGGTGCGCACCGGCACCACCAGCCTCGCCGAGGCGCTGGCCGCGAC GGAGAGCGCATGA Protein sequence : MQPHIQPAALLRPLSPDGESASRTKPGAFAADAGAATLNDPDSAPAVRLLTDTLREATRRNASDLHIEPAENSWRVRLRI DGVLHEMAQPPAHLRDAFITRVKVLARMDIAERRVPQDGRLRIATSPGRVEDYRVNSLPTLFGEKLVLRRLDALPADLSL DSLGLDAQQREALDSAIRAPHGLVLVTGPTGSGKTLSLYCFLNLLNSEARNLCSVEDPAEIQLAGINQVSVREKAGLTFA VALRAFLRQDPDVIMVGEIRDEETADVAVKAAQTGHLVLSTLHTNDAPAAVARLIDIGVAPYNLAAALRMVTAQRLVRRL CAACRAPAPQSAAALRAAGFAEAELAGWQPFAPTGCAACHGIGYRGRVGVHQVMPVSDAMRELIVARASTQELARQAHSE GVGTLRDAALALVRTGTTSLAEALAATESA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-58 | 48 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-58 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BC1003_3038 | YP_003908278.1 | type II secretion system protein E | VFG2426 | Protein | 1e-112 | 76 |
| BC1003_3038 | YP_003908278.1 | type II secretion system protein E | VFG2048 | Protein | 5e-59 | 48 |
| BC1003_3038 | YP_003908278.1 | type II secretion system protein E | VFG1876 | Protein | 6e-54 | 43 |
