Gene Information

Name : BC1003_2882 (BC1003_2882)
Accession : YP_003908126.1
Strain :
Genome accession: NC_014539
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3367154 - 3367996 bp
Length : 843 bp
Strand : +
Note : KEGG: bxe:Bxe_A0670 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence : 
ATGCGAATTCTGATTGCCGAAGACGACAGCATACTCGCGGACGGTCTGGTTCGATCACTCCGCCAATCGGCCTATGCCGT
CGACCACGTGAAGAACGGCGTGGAGGCCGACACCGCGCTGTCCATGCAAAGTTTCGACCTGCTGATCCTCGATCTCGGCC
TGCCGCGCATGTCCGGGCTCGAGGTGCTGCGCCGCCTGCGCGCCCGCAATTCGAACCTGCCGGTGCTGATTCTCACCGCG
GCGGACAGCGTCGACGAGCGCGTCAAGGGCCTCGATCTCGGCGCCGACGACTACATGGCCAAGCCGTTCGCGCTCAACGA
ACTGGAAGCCCGCGTGCGCGCGCTTACGCGCCGCGGCGCAGGCGGCGGCCCGACCGTCGTGCGGCACGGCTCGCTGTCGT
TCGATCAGGTGGGCCGGATCGCTTATATCAACGATCAGGTGATCGACCTGTCGGCGCGCGAGCTGGGCCTGCTGGAAGTG
CTGCTGCAGCGGATCGGCCGGCTGGTGTCGAAGGAACAACTGGTCGACCATCTGTGCGAATGGGGCGAGGAAGTCAGCAA
CAACGCAATCGAGGTGTACGTGCACCGGCTGCGTAAGAAGATCGAGCCGAGCGGCGTACGCATCATTACCGTGCGTGGAC
TTGGTTACTGCCTTGAAAAGGCGGTCGTGTCCGCAAACCCCGCTGCAGGGGGCACTGTGAACGCCACTGTAAGCGGCACG
GCAAACGCCGACGCCAGCCCCACCGCCGCGCCGTCGCCCAACGGCCCGGAGCCGGCGCCTTCGCCCTCCTCGCCAACGCA
GACGCCGTCGGGCGCCATGCCGGCGAGCCATCACTACAAATAG

Protein sequence : 
MRILIAEDDSILADGLVRSLRQSAYAVDHVKNGVEADTALSMQSFDLLILDLGLPRMSGLEVLRRLRARNSNLPVLILTA
ADSVDERVKGLDLGADDYMAKPFALNELEARVRALTRRGAGGGPTVVRHGSLSFDQVGRIAYINDQVIDLSARELGLLEV
LLQRIGRLVSKEQLVDHLCEWGEEVSNNAIEVYVHRLRKKIEPSGVRIITVRGLGYCLEKAVVSANPAAGGTVNATVSGT
ANADASPTAAPSPNGPEPAPSPSSPTQTPSGAMPASHHYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-39 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1003_2882 YP_003908126.1 winged helix family two component transcriptional regulator BAC0083 Protein 3e-36 45
BC1003_2882 YP_003908126.1 winged helix family two component transcriptional regulator BAC0638 Protein 7e-30 44
BC1003_2882 YP_003908126.1 winged helix family two component transcriptional regulator BAC0487 Protein 7e-37 43
BC1003_2882 YP_003908126.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 2e-31 42
BC1003_2882 YP_003908126.1 winged helix family two component transcriptional regulator BAC0347 Protein 3e-33 41
BC1003_2882 YP_003908126.1 winged helix family two component transcriptional regulator BAC0308 Protein 5e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1003_2882 YP_003908126.1 winged helix family two component transcriptional regulator VFG1390 Protein 5e-36 44
BC1003_2882 YP_003908126.1 winged helix family two component transcriptional regulator VFG0473 Protein 1e-40 44