Gene Information

Name : BC1003_2688 (BC1003_2688)
Accession : YP_003907932.1
Strain :
Genome accession: NC_014539
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 3154416 - 3155570 bp
Length : 1155 bp
Strand : +
Note : TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: bpy:Bphyt_3099 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding

DNA sequence :
ATGTTCTCGCAAACCGACTTCGTCCATATGGAACGCGCGCTCGCGCTGGCCAGGCGCGGCATGTACACCACCGACCCCAA
CCCGCGCGTGGGCTGCGTGATCGTCCAGAACGGCGAAGTGATCGGCGAAGGATTCACGCAACCGGCCGGGCAGGATCATG
CCGAAATTCGTGCGATGAAAGACGCACGTTCGCGCGGTCATGATCTGCGCGGCGCAACCGCTTACGTCACGCTCGAACCG
TGCAGCCATTTTGGCCGCACGCCGCCGTGCGCGAGCGCGCTGATCGAAGCGCAAGTCGGGCGCGTGGTCGCCGCGATGGA
AGACCCGAACCCGCAAGTGTCGGGGCGCGGCCTCGCCATGTTGCGCGACGCCGGCATCGAGGTGCGTTGCGGCCTGCTCG
CCAACGAAGCGCACGAACTGAATATCGGCTTCGTGTCGCGTATGACGCGCGGCCGGCCGTGGGTGCGCATGAAAGTCGCC
GCGTCGCTCGACGGCCGCACCGGCTTGCCGTCCGGCGTGAGCCAATGGATCACCGGTGAAGCGGCACGCGCCGACGGCCA
TGCATGGCGTGCGCGCGCCTCGGCGATCCTGACGGGCATCGGCACCGTCAGGGAAGACGATCCGCGCATGACGGTGCGCG
CCGTCGAGACGCCGCGCCAGCCGCAACGCGTGCTGATCGACAGTCAGTTGGAGGTGCCGCCGCAGGCGCAGATTCTGGCC
GGCGCACCCACGCTGATTTTCTGCGGCAATCTGGATGAGCGGCATCGCGAACGCGCGCAAGCGCTGCGCGATCGCGGCGC
TGAAATTGTCGAAATGGCCAACGGAGCCGGCAAGGTAGACCTGCCCGGCATGCTCAAGGCGCTGGGCGAGCGCCAGGTGA
ACGAGCTGCATGTGGAAGCCGGCTACAAGCTGAACGGCTCGCTTCTGCGCGAAGGCTGCGTGGACGAACTGCTGGTGTAC
CTTGCGCCCAGCCTGCTCGGCATCGACTCGATGAGCATGTTCAACCTGAGCGCGCCCGAAACGCTGGAAGGCCGCGTCAA
GCTTGCGTTTCACAACGTCGAGCGCATCGGCGACGATTTGCGGATTCTCGCGCGCCTCGTGCCGGCCGGCACCGCGAGCG
GAACCGACGCCGCGTCGCAACCCGTTTCGTTTTGA

Protein sequence :
MFSQTDFVHMERALALARRGMYTTDPNPRVGCVIVQNGEVIGEGFTQPAGQDHAEIRAMKDARSRGHDLRGATAYVTLEP
CSHFGRTPPCASALIEAQVGRVVAAMEDPNPQVSGRGLAMLRDAGIEVRCGLLANEAHELNIGFVSRMTRGRPWVRMKVA
ASLDGRTGLPSGVSQWITGEAARADGHAWRARASAILTGIGTVREDDPRMTVRAVETPRQPQRVLIDSQLEVPPQAQILA
GAPTLIFCGNLDERHRERAQALRDRGAEIVEMANGAGKVDLPGMLKALGERQVNELHVEAGYKLNGSLLREGCVDELLVY
LAPSLLGIDSMSMFNLSAPETLEGRVKLAFHNVERIGDDLRILARLVPAGTASGTDAASQPVSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-61 44
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-61 44