Gene Information

Name : BC1003_1247 (BC1003_1247)
Accession : YP_003906515.1
Strain :
Genome accession: NC_014539
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 1436347 - 1438005 bp
Length : 1659 bp
Strand : +
Note : KEGG: bpy:Bphyt_2498 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase

DNA sequence :
GTGAGCACGCAAGGGCAGGGGCAAGCGACGCGGCAGCAGCGTGAAGCCGGGGCAGCCGGGGCTGAAACGCCGCTGCTGGA
GCTGGATCATCTTCACGTGAGCTTCGGCGAAACGGTCGCCGTCAACGACGTCACGCTGGCAATCCGGCGCGGCGAGCGCG
TCGCGCTCGTCGGCGAATCGGGTTCGGGCAAGAGCGTGACGGCGTTGTCGGTGTTGCGCCTGTTGAGCGACGCGCAGGTG
AGCGGCTCGATCCGTTTCGACGGCGAGGATCTGCTTGCCAAGACCGAGCGCGAGATGCGCGGCCTGCGCGGCTCGGACAT
CGCGATGATCTTTCAGGAGCCGATGACCGCGCTCAATCCGCTCTACACGGTAGGCGACCAGATTGCCGAAACGATTGTCG
TGCACGACGGCGTGTCGGCAACGGAAGCCCGCAAGCGCGCCGTTGCGCTGCTCGGGCGCACGGGCATTCCCGAACCGGGC
AAGCGCGTGAACAGTTATCCGCACGAACTTTCCGGCGGACAGCGGCAACGCGCGATGATCGCGATGGCGCTGGCGTGCCG
GCCGCGTTTGCTGCTCGCGGACGAGCCGACCACCGCGCTCGACGTGACGATTCGCGCGCAGATAGTCGAACTGCTGCTCG
AACTGCAGCGCGATGAAGCGGCAAAGCGCGGCATGGCGGTGCTGCTGATCACGCATGACCTCAACCTTGTGCGCAATTTT
GCCGAGCGTATCGCGGTCATGGAAAAGGGCGTGCTGGTGGAGAGCGGGCCGGTGGCCCAGGTCTTCGAGTCGCCGCAGCA
CCCGTACACGCAGCGGCTCCTCGCTAGCCGGCCGCAGCGCACGGTGGTGCCGGTGTTGCCCATTGCGCCGGTGCTTCTCG
AAGCCCGCGACGTGTCCGTCGATTTCAAGACGAAGCTGCCGGGCTTTGCCGGCTGGTTCCGCTCCGGGCGGTTTCGGGCG
GTCGCCGATGCGAATGTTTCCGTGCGGCAGGGCGAGACCCTCGGGATTGTCGGCGAATCGGGCTCGGGCAAATCCACGCT
GGCCATGGCGCTGCTCGGCCTGCAACGCACCGCGCACGGCGAGATCGAGTTTGAGGGCAGGGCGCTCGGCAGCTACCGCG
GCGTGGAGCAGACGGCGCTGCGCTCGCACATGCAGGTGGTGTTTCAGGACCCGTTCAGCTCGCTTTCGCCGCGGCAGACA
GTCGAGCGGATTGTCGGCGAAGGACTGGCGCTGCACCGCCCGCAGATGTCGCCGCAAGCGCGCCGCGACAAGGTGCTTGC
CGTTCTTCGCGAAGTCGGCATCGACCGTACCGCGCTGCTGCGCTATCCGCACGAGTTTTCCGGCGGGCAGCGCCAGCGCA
TAGCCATTGCGCGCGCGCTCGTGGTCGAGCCGCGCATTCTGGTGCTGGATGAGCCGACCAGCGCGCTGGACGTTTCCATC
CAGCAGCACGTGCTGAAACTTCTCGCCGGGTTGCAACAGAAGTACAACCTCGGCTTCGTTTTCATCAGCCACGATCTGGC
CGTGATCGGGGCGATGGCGCATCGCGTGGCGGTCATGCAAAACGGTTCTATCGTGGAAAGCGGAGACGTTGAGAAAATCT
TTGCGACGCCGTCGCACCCGTACACCCGAAAGCTCCTGAAAGCCGCGTTGGACCATTGA

Protein sequence :
MSTQGQGQATRQQREAGAAGAETPLLELDHLHVSFGETVAVNDVTLAIRRGERVALVGESGSGKSVTALSVLRLLSDAQV
SGSIRFDGEDLLAKTEREMRGLRGSDIAMIFQEPMTALNPLYTVGDQIAETIVVHDGVSATEARKRAVALLGRTGIPEPG
KRVNSYPHELSGGQRQRAMIAMALACRPRLLLADEPTTALDVTIRAQIVELLLELQRDEAAKRGMAVLLITHDLNLVRNF
AERIAVMEKGVLVESGPVAQVFESPQHPYTQRLLASRPQRTVVPVLPIAPVLLEARDVSVDFKTKLPGFAGWFRSGRFRA
VADANVSVRQGETLGIVGESGSGKSTLAMALLGLQRTAHGEIEFEGRALGSYRGVEQTALRSHMQVVFQDPFSSLSPRQT
VERIVGEGLALHRPQMSPQARRDKVLAVLREVGIDRTALLRYPHEFSGGQRQRIAIARALVVEPRILVLDEPTSALDVSI
QQHVLKLLAGLQQKYNLGFVFISHDLAVIGAMAHRVAVMQNGSIVESGDVEKIFATPSHPYTRKLLKAALDH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-86 45
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-86 45
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-86 45
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-86 45
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 5e-96 42