Gene Information

Name : BC1003_1218 (BC1003_1218)
Accession : YP_003906487.1
Strain :
Genome accession: NC_014539
Putative virulence/resistance : Unknown
Product : Tex-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 1399543 - 1401888 bp
Length : 2346 bp
Strand : -
Note : KEGG: bpy:Bphyt_2527 RNA binding S1 domain protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold

DNA sequence :
ATGACGGAAACCGTAGCACTCAAGATCGTACAGCGCATCGCCGCCGAACTGTCCGTACAGCCGCGCCAGGTCGCGGCAGC
GGTGCAACTCCTCGACGAAGGAGCGACTGTTCCGTTCATCGCGCGCTACCGCAAGGAAGTGACCGACAATCTCGACGACA
CGCAGTTGCGTAACCTCGAGGAACGCCTGCTGTATCTGCGCGAGCTCGAAGACCGGCGCGCGGCGATCATCGCCAGCATC
GACGAACAGGGCAAGCTCACCGAGGAGCTGCGCACGGCCATCGAGGGCGCCGACAGCAAGCAGGTGCTCGAAGACCTGTA
TCTCCCGTATAAGCCGAAGCGCCGCACGCGCGCGCAGATTGCGCGCGAGGCGGGCCTCCAGCCGCTCGCCGACGCGTTGC
TCGGCAATCCGCTGCTCGACCCGCAAAGCGAAGCCGCCGCTTATGTGAACGCCGACAAAGGTGTCGCCGACGTGAAAGCC
GCGCTCGACGGCGCGCGCGACATTCTCTCCGAACAGTTCGGCGAAACGGCTGAACTGCTCGGCAAACTGCGCGACTACCT
GTTCAATCAGGGCGTCGTGTCGTCAAAAGTGGTCGAGGGCAAGGAAACCGCGGAAGAAGAAAAATTCCGCGATTACTACG
ACTACGCGGAAACCATCCGCACTGTACCGTCGCATCGCGCGCTGGCGCTGTTCCGCGGCCGCAACGCGGGCGTGCTGATG
ATCAAGCTCGGCCTTGGCGAAGAACTGGACGCGCAAGTGCCGCACCCGGGCGAAGCGCTGATCGCGCGTCATTTCGGCAT
TACGAATCAGAACCGTCCGGCCGACAAATGGCTCGCGGACGTGTGCCGCTGGTGCTGGCGCGTGAAGGTGCAGCCGCACC
TCGAAAATGAACTGCTCACGAACCTGCGCGACGAAGCGGAGCACGAGGCGATTCGCGTGTTCGCGCGCAATCTGAAAGAC
CTGTTGCTGGCGGCGCCCGCAGGACCGAAGGCCGTGATCGGTCTCGATCCGGGCTTGCGCACCGGTGTCAAGGTTGCGGT
TGTCGACCGTACCGGCAAAGTGCTCGCCACCGACACCATCTACCCGCACGAGCCCCGCCGCGACTGGGACGGCTCGATTG
CGAAACTCGCGCGTCTATGCGCGCAGACCCAGGCGGAGCTGATCAGCATCGGCAATGGCACGGCGTCACGCGAAACGGAC
AAGCTGGCGAGCGAGCTGATCGCGCGCCATCCGGAATTCAAGCTGCAGAAGATCGTCGTGTCGGAGGCGGGCGCCTCGGT
CTACTCGGCCTCTGAACTCGCGGCCAAGGAATTTCCGGACATGGACGTATCGCTGCGCGGCGCGGTGTCGATTGCGCGGC
GTCTGCAAGATCCGCTCGCGGAGCTGGTGAAGATCGAGCCGAAGGCAATCGGCGTCGGCCAATACCAACACGACGTGAAC
CAGCGCGAACTGGCGCGCTCGCTCGACGCGGTTGTCGAAGACTGCGTGAACGCCGTCGGCGTGGACGCGAATACCGCGTC
TGTGGCGTTGCTCGCGCGCGTGTCGGGGCTCAACGCAACCCTGGCGCGCAACATCGTCGACTACCGCGATGCGAACGGCC
CCTTCCCTTCGCGCGAGCATCTGCGCAAAGTGCCGCGGCTTGGCGACAAGACGTTCGAACAGGCGGCGGGGTTTCTGCGC
ATCAACAATGGTGAGAATCCGCTCGACCGCTCCTCGGTGCACCCTGAGGCGTATCCGGTCGTCGAACGGATCCTTGCGAA
GATCAACAAACACGTGGGCGAAGTGCTCGGCAATCGCGACGCGCTGCGCGGCCTGTCGCCCGCCGAATTCGTCGACGATC
GCTTCGGTCTGCCGACCGTTCGCGACATTCTGCTCGAACTCGAAAAACCGGGCCGCGATCCGCGTCCGGAGTTCAGAACC
GCAACTTTCCGCGAAGGCGTCGAGAAGGTCAGCGACCTGACGCCCGGCATGGTGCTAGAAGGCGTGGTGACGAACGTGGC
AGCGTTTGGCGCGTTTATCGACGTGGGCGTGCATCAGGACGGTCTCGTGCACGTGTCGGCCATGTCGACAAAGTTCATCA
AAGATCCGCACGAAGTGGTCAAGGCCGGACAGATCGTCAAGGTCAAGGTGCTCGAAGTGGACGTGAAGCGGCAGCGCATC
GCGCTCACCATGCGTCTGGACGACGAGTTCGGCGCAGCCACGGCGCGCAGCGGCGGGGGCGCCCAGCAGGACCGCGGCGG
CTTTGGCCGCTCGAACGGCAACGGCCGCGGCGCGCCGCAGCGTTCGCGCGAGCCCGAACCGGGGGGCGCGATGGCCGCGG
CCTTCGCGAAGCTCAAGCAGAAGTAA

Protein sequence :
MTETVALKIVQRIAAELSVQPRQVAAAVQLLDEGATVPFIARYRKEVTDNLDDTQLRNLEERLLYLRELEDRRAAIIASI
DEQGKLTEELRTAIEGADSKQVLEDLYLPYKPKRRTRAQIAREAGLQPLADALLGNPLLDPQSEAAAYVNADKGVADVKA
ALDGARDILSEQFGETAELLGKLRDYLFNQGVVSSKVVEGKETAEEEKFRDYYDYAETIRTVPSHRALALFRGRNAGVLM
IKLGLGEELDAQVPHPGEALIARHFGITNQNRPADKWLADVCRWCWRVKVQPHLENELLTNLRDEAEHEAIRVFARNLKD
LLLAAPAGPKAVIGLDPGLRTGVKVAVVDRTGKVLATDTIYPHEPRRDWDGSIAKLARLCAQTQAELISIGNGTASRETD
KLASELIARHPEFKLQKIVVSEAGASVYSASELAAKEFPDMDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVN
QRELARSLDAVVEDCVNAVGVDANTASVALLARVSGLNATLARNIVDYRDANGPFPSREHLRKVPRLGDKTFEQAAGFLR
INNGENPLDRSSVHPEAYPVVERILAKINKHVGEVLGNRDALRGLSPAEFVDDRFGLPTVRDILLELEKPGRDPRPEFRT
ATFREGVEKVSDLTPGMVLEGVVTNVAAFGAFIDVGVHQDGLVHVSAMSTKFIKDPHEVVKAGQIVKVKVLEVDVKRQRI
ALTMRLDDEFGAATARSGGGAQQDRGGFGRSNGNGRGAPQRSREPEPGGAMAAAFAKLKQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 62