Gene Information

Name : BC1003_1179 (BC1003_1179)
Accession : YP_003906448.1
Strain :
Genome accession: NC_014539
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1356212 - 1356955 bp
Length : 744 bp
Strand : +
Note : TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; KEGG: bpy:Bphyt_2566 lipoprotein releasing system, ATP-binding protein; SMART: AAA ATPase

DNA sequence : 
ATGAATGACCGTTCCGCAAGCTTATCGGTGGCCGCTCAGGACATGACGCCTCATCCCTATGTGCTGGAAGCTACCGGCAT
TTCCAAGTCGTTCGTGCAGGGCGGCCTGAACGTGCAGGTGCTCAACAACACGCAACTGAGCGTGCGGCGCGGCGAGAAGC
TCGCCATCGTCGGCGCGTCGGGTTCCGGCAAGAGCACGCTTTTGCATGTGCTCGGCGGTCTGGACGATCCGAGCGCGGGC
CATGTGTCCGTCATGGGCAAGCCGTTCACCAAACTGTCCGAGCGCGAGCGCAACGACTTGCGCAATCGCGCGCTCGGCTT
CGTGTATCAGTTTCATCATCTGCTGCCGGAGTTTTCCGCGCTGGACAACGTGGCGATGCCGCTGCGCATTCGCCGCATGA
CCACGGAAGCGTCGCGCCGCGAAGCGCTCGCCGTGCTGGAGCGCGTCGGCATGGCGCATCGCGCGAAACATCGGCCGGGC
GAGCTGTCGGGCGGCGAGCGGCAGCGCGTCGCAATCGCGCGGGCGCTGGTCACGAAACCGGCGTGCGTGCTCGCCGACGA
ACCCACCGGCAACCTGGACGGCAGCACCGCGGACACGGTTTTCAACCTGATGCTCGAACTGTCGCGCACGCTCGAAACGA
GTTTTGTGATCGTCACGCACGACCCGGAACTGGCGGGCCGCTGCGACCGCATCATGCGGCTGCGCGACGGCGTGCTGCAC
GAAGAGCCGCCAGTGCCGGTATGA

Protein sequence : 
MNDRSASLSVAAQDMTPHPYVLEATGISKSFVQGGLNVQVLNNTQLSVRRGEKLAIVGASGSGKSTLLHVLGGLDDPSAG
HVSVMGKPFTKLSERERNDLRNRALGFVYQFHHLLPEFSALDNVAMPLRIRRMTTEASRREALAVLERVGMAHRAKHRPG
ELSGGERQRVAIARALVTKPACVLADEPTGNLDGSTADTVFNLMLELSRTLETSFVIVTHDPELAGRCDRIMRLRDGVLH
EEPPVPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1003_1179 YP_003906448.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 6e-33 43
BC1003_1179 YP_003906448.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 5e-39 42