Gene Information

Name : BC1003_1174 (BC1003_1174)
Accession : YP_003906443.1
Strain :
Genome accession: NC_014539
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 1348646 - 1350172 bp
Length : 1527 bp
Strand : -
Note : KEGG: bxe:Bxe_A1561 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type

DNA sequence :
ATGAACGAACCGATCCAACCGAACCTCGTGCCCGAGGTGGACGACAACAAGATCATCGCGGAGCGCCGCGAGAAGCTGCG
CGAGTTGCGCGAGCAAGGCGTCGCGTATCCGAACGATTTCCGCCCTACGCATCACGCGGAAGATCTGCAGGCGCAGTTCG
AGCACGCCGACAAGGAAGCGCTCGAGGCCAACCCGCTGGAAGTCGCGATTGCCGGCCGCATGATGCTCAAACGCGTGATG
GGCAAGGCGAGCTTTGCGACCGTGCGCGACGGCTCGGGTCAGATCCAGTTCTTCATTACCCCCGCCGACGTCGGCCAGGA
AACGTACGACGCCTTCAAGAAGTGGGACATGGGCGACATTGTCGCGGCCCGCGGCGTGCTGTTTCGCACCAACAAGGGCG
AGCTGTCGGTGCGCTGCACGCAGTTGCGCCTGCTGTCCAAGTCGCTGCGTCCGCTGCCGGACAAGTTCCATGGTCTGTCC
GACCAGGAAATGAAGTATCGGCAGCGCTACGTCGATCTGATCGTTACGCCGGAAACGCGCAAGACTTTTGTCGCCCGCAC
CAAGGCAATTTCGTCGATCCGCAAGTTCATGGCCGACGCCGGCTTCATGGAAGTCGAAACGCCGATGCTCCACCCGATTC
CCGGCGGCGCGGCGGCCAAGCCGTTTACCACGCACCACAACGCGCTCGACATGCAGATGTTCCTGCGCATCGCGCCCGAG
CTGTATCTGAAGCGCCTCGTGGTGGGCGGCTTCGAGCGCGTGTTCGAGATCAACCGTAATTTCCGCAACGAGGGCGTGTC
CGTGCGCCACAACCCGGAATTCACGATGATCGAGTTCTATGCGGCCTACACCGACTACAAGTGGCTGATGGACTTCACCG
AGCAGTTGATCCGTCAGGCGGCCATCGACGCATTGGGCACGGCTACCATCACCTATCAGGGGCGCGAGCTCGATCTGTCC
AAGCCGTTCCACCGTCTGACGATCACGCAAGCCATTCAGAAATACGCGCCGCAGTACACGGACGAGCAGCTCGCCGACAG
CGCGTTCCTGCGCAGCGAACTCAAGAAGTTCGGCGTGGATGCGTCGCAGCCGCAGTTCCTGAACGCGGGCGTGGGGTCGC
TGCAACTGGCGCTGTTCGAAGAGACCGCCGAGTCGCAACTTTGGGAGCCGACGTACATCATCGACTACCCGGTCGAGGTG
TCGCCGCTCGCGCGCGCGTCGGACAAAGTGGAAGGCATCACGGAGCGCTTCGAACTGTTCATCACCGGGCGTGAGATCGC
CAATGGCTTCTCCGAGCTGAACGATCCGGAAGACCAGGCTGCGCGCTTCAAGAAACAGGTCGACCAGAAAGACGCCGGCG
ACGAGGAAGCCATGTTCTACGACGCCGACTACATCCGTGCGCTCGAATACGGCATGCCGCCGGCGGGCGGTTGCGGCATC
GGCATCGACCGGCTGGTGATGATGCTCACCGACAGTCCAAGTATTCGCGACGTGATTCTGTTCCCGCACCTGCGCCGCGA
AGATTGA

Protein sequence :
MNEPIQPNLVPEVDDNKIIAERREKLRELREQGVAYPNDFRPTHHAEDLQAQFEHADKEALEANPLEVAIAGRMMLKRVM
GKASFATVRDGSGQIQFFITPADVGQETYDAFKKWDMGDIVAARGVLFRTNKGELSVRCTQLRLLSKSLRPLPDKFHGLS
DQEMKYRQRYVDLIVTPETRKTFVARTKAISSIRKFMADAGFMEVETPMLHPIPGGAAAKPFTTHHNALDMQMFLRIAPE
LYLKRLVVGGFERVFEINRNFRNEGVSVRHNPEFTMIEFYAAYTDYKWLMDFTEQLIRQAAIDALGTATITYQGRELDLS
KPFHRLTITQAIQKYAPQYTDEQLADSAFLRSELKKFGVDASQPQFLNAGVGSLQLALFEETAESQLWEPTYIIDYPVEV
SPLARASDKVEGITERFELFITGREIANGFSELNDPEDQAARFKKQVDQKDAGDEEAMFYDADYIRALEYGMPPAGGCGI
GIDRLVMMLTDSPSIRDVILFPHLRRED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 4e-126 55
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 6e-78 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1003_1174 YP_003906443.1 lysyl-tRNA synthetase VFG1668 Protein 2e-126 55