Gene Information

Name : BC1003_1090 (BC1003_1090)
Accession : YP_003906361.1
Strain :
Genome accession: NC_014539
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 1248628 - 1250559 bp
Length : 1932 bp
Strand : -
Note : KEGG: bxe:Bxe_A1449 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGAACGCCAATCCGAAGTTTCTTTCCGCCGACGCCCACGTCGACGAAGCCGCCGTCGCGCCGCTGCCGAATTCCCGCAA
GGTCTACGTGACCGGCTCCCGTCCCGACATCCGCGTGCCGATGCGCGAAATCACCCAGGCCGATACGCCTGACAGCTTCG
GCGGCGAAAAGAATCCGCCCGTCTACGTCTACGATACGTCGGGCCCGTACTCCGACCCGGACGCGAAGATCGACATTCGC
GCCGGTTTGCCGGCGCTGCGTCAGCGCTGGATCGAGGAACGCGGCGACACCGAGGCGCTCACCGGCCTCACGAGCGAATA
CGGCCGCGAGCGCGCCGCCGACCCGGCCACCGCGGAACTGCGTTTCCAGGGCCTGCACCGCACGCCGCGCCGCGCGCTGC
CCGGCAAGAACGTTTCGCAGATGCACTACGCACGTAAAGGCATCATCACGCCGGAAATGGAGTACATCGCGATTCGCGAG
AACCAGCGCCGCGCCGAATATCTGGAGAGCCTGAAGAAGAGCGGCCCGAACGGCGAAAAACTCGCCGCGATGATGGGCCG
CCAGCATCCGGGCCAGGCGTTCGGTGCCAGCGCGTTCGGCCCGAACGGCGTGACGGAGATCACCCCCGAATTCGTGCGCG
AAGAAGTGGCGCGCGGCCGCGCGATCATTCCGAACAACATCAATCACCCCGAAAGCGAGCCGATGATCATTGGCCGCAAT
TTCCTCGTGAAGGTAAACGCGAACATCGGCAACTCGGCGGTGACCTCCTCCATCGGCGAAGAAGTCGACAAGATGACGTG
GGCGATCCGCTGGGGCGGCGACACGGTGATGGACCTGTCCACCGGCAAGCACATCCACGAGACGCGCGAGTGGATCATCC
GCAATTCGCCGGTGCCTATCGGCACGGTGCCCATCTACCAGGCGCTCGAAAAGGTCAATGGCAAGGCCGAAGACCTGACC
TGGGAAATTTTCCGCGACACGCTGATCGAACAGGCCGAGCAAGGCGTCGACTATTTCACGATCCACGCGGGCGTGCGTCT
GCAATACGTGCCGCTCACCGCGAAGCGCATGACCGGCATTGTGTCGCGCGGCGGCTCGATCATGGCGAAGTGGTGCCTCG
CGCATCACAAGGAAAGCTTCCTGTACGAGCATTTCGAAGACATCTGCGAAATCATGAAGGCGTATGACGTGGCCTTCTCG
CTCGGCGACGGCCTGCGCCCCGGCTCGATCTACGACGCGAACGACGAAGCGCAGCTCGGCGAACTGAAGACGCTCGGCGA
ACTGACGCAGATTGCGTGGAAGCACGACGTGCAGACGATGATCGAAGGCCCCGGCCACGTGCCGATGCAACTGATCAAGG
AGAACATGGACCTGCAGCTCGAATGGTGCGACGAAGCGCCCTTCTACACGCTCGGGCCGCTCACCACCGACATCGCGCCG
GGTTACGACCACATCACGTCGGGGATCGGCGCGGCGATGATCGGCTGGTTCGGCACGGCGATGCTCTGCTATGTGACGCC
GAAGGAGCACCTCGGCTTGCCGAACAAGGACGACGTGAAGACCGGCATCATCACCTACAAGCTCGCTGCGCATGCCGCCG
ACCTCGCCAAGGGCCATCCGGGCGCGCAGGTGCGCGACAACGCGCTCTCGAAGGCGCGCTTCGAGTTCCGCTGGGAAGAC
CAGTTCAACCTGGGCCTCGATCCGGACAAGGCGCGCGAATTCCACGACGAAACACTGCCGAAGGATTCGGCCAAGGTCGC
GCATTTCTGCTCGATGTGCGGCCCGCACTTCTGCTCGATGAAGATCACCCAGGACGTGCGCGAGTTCGCCGCGCAACAGG
GCGTGACCGACGACGAGGCGCTGAAAAAAGGCATGGAAGTGAAGTCGATCGAGTTCATGAAGAAGGGCGCCGAAATTTAC
CAGCGGCAATGA

Protein sequence :
MNANPKFLSADAHVDEAAVAPLPNSRKVYVTGSRPDIRVPMREITQADTPDSFGGEKNPPVYVYDTSGPYSDPDAKIDIR
AGLPALRQRWIEERGDTEALTGLTSEYGRERAADPATAELRFQGLHRTPRRALPGKNVSQMHYARKGIITPEMEYIAIRE
NQRRAEYLESLKKSGPNGEKLAAMMGRQHPGQAFGASAFGPNGVTEITPEFVREEVARGRAIIPNNINHPESEPMIIGRN
FLVKVNANIGNSAVTSSIGEEVDKMTWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGKAEDLT
WEIFRDTLIEQAEQGVDYFTIHAGVRLQYVPLTAKRMTGIVSRGGSIMAKWCLAHHKESFLYEHFEDICEIMKAYDVAFS
LGDGLRPGSIYDANDEAQLGELKTLGELTQIAWKHDVQTMIEGPGHVPMQLIKENMDLQLEWCDEAPFYTLGPLTTDIAP
GYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPNKDDVKTGIITYKLAAHAADLAKGHPGAQVRDNALSKARFEFRWED
QFNLGLDPDKAREFHDETLPKDSAKVAHFCSMCGPHFCSMKITQDVREFAAQQGVTDDEALKKGMEVKSIEFMKKGAEIY
QRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 74
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 74
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 72