Gene Information

Name : Thet_2352 (Thet_2352)
Accession : YP_003905193.1
Strain : Thermoanaerobacter sp. X513
Genome accession: NC_014538
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 2316569 - 2317612 bp
Length : 1044 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: tit:Thit_2281 integrase catalytic region

DNA sequence :
ATGGTTCATAATAATTGTACCACAAAAAAGCGTTCTTTTAAACATTTAAGTAGCTATGAACGAGGAGAAATCTATGCATT
ACTCAAGGAAGGAAGGAGCATTCGGTATATTGCTAAAAAACTTAATCGATCTCCAAGTACTATAAGCCGTGAAATTAAAC
GTGGAACTACTACACAACTTAGAAGTGATTTGTCTTCTTATACAAGCTATTTTCCTGAAACTGGTCAGGCTGTCTACGAA
AAAAATCGTTCAAATTGTGGAGCTAAATTTAAAGCAGCTAAAGCAGAAGATTTTTTGAAATATGCTGAAAATAAAATATT
AAATGAAAAATGGTCACCAGACGCAGTTGTAGGTTATTGTAAGAAGGACCCAAGTTGGAATAATAAAACCATTGTTTGTA
CTAAAACACTCTACAACTATATAGATAGAGGATTATTAAAAGTTAAAAACATTGATTTACCTTTAAAACTACGTTTAAAA
CCAAGGAAGAAACAAAACCGTAAAAATAAACGTATTATGGGTAAAAGTATTGATTTTAGGCCTAAAGAAGTTGAAAGCCG
TGAAGTTTTTGGGCATTGGGAAATAGATACGTTAATTGGCAAGAAGTCTAATGACAAGGTCCTTTTAACATTAATAGAGC
GTAAGACTCGCCATGAAATAATATTACTATTGGATACAAAAGACAGTAAATCTGTTAAAGATGCACTATCAAAATTAAAA
GATATGTTTGGTGACAATTTAAGCAAGGTCTTTAAAACAATAACATCTGATAATGGTACAGAGTTTAGTGATTTAGAAAG
TGCTCTTTTAGAATATGGCGTAGAAGTATATTATACACATCCATATTCATCTTGGGAAAGAGGTACAAATGAACGACATA
ATGGTCTTATACGACGTTTTATCCCTAAAGGAAAAAGTATTAGAGATTTATCTATAGATACGATAAAGAAAGTAGAAAAT
TGGCTTAATAACCTTCCACGAAAATTGTTAAATTATAAAACACCTAAAGAATGCTTTTATGAGGAACTGGCAAAAATTTG
TTAA

Protein sequence :
MVHNNCTTKKRSFKHLSSYERGEIYALLKEGRSIRYIAKKLNRSPSTISREIKRGTTTQLRSDLSSYTSYFPETGQAVYE
KNRSNCGAKFKAAKAEDFLKYAENKILNEKWSPDAVVGYCKKDPSWNNKTIVCTKTLYNYIDRGLLKVKNIDLPLKLRLK
PRKKQNRKNKRIMGKSIDFRPKEVESREVFGHWEIDTLIGKKSNDKVLLTLIERKTRHEIILLLDTKDSKSVKDALSKLK
DMFGDNLSKVFKTITSDNGTEFSDLESALLEYGVEVYYTHPYSSWERGTNERHNGLIRRFIPKGKSIRDLSIDTIKKVEN
WLNNLPRKLLNYKTPKECFYEELAKIC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_0379 YP_697708.1 IS1470, transposase Not tested Not named Protein 7e-68 52
CPR_0383 YP_697712.1 IS1470, transposase Not tested Not named Protein 4e-68 52
CPR_0648 YP_697974.1 IS1470, transposase Not tested Not named Protein 6e-67 52
CPR_1088 YP_698410.1 IS1470, transposase Not tested Not named Protein 5e-67 52
CPR_0321 YP_697650.1 IS1470, transposase Not tested Not named Protein 3e-67 52
CPR_0314 YP_697643.1 IS1470, transposase Not tested Not named Protein 2e-67 52
CPR_0967 YP_698290.1 IS1470, transposase Not tested Not named Protein 2e-67 52
CPR_0628 YP_697955.1 IS1470, transposase Not tested Not named Protein 1e-67 52
CPR_1078 YP_698400.1 IS1470, transposase Not tested Not named Protein 1e-67 52
CPR_0659 YP_697986.1 IS1470, transposase Not tested Not named Protein 3e-42 48