Gene Information

Name : Thet_0189 (Thet_0189)
Accession : YP_003903143.1
Strain : Thermoanaerobacter sp. X513
Genome accession: NC_014538
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : 5.3.1.5
Position : 190484 - 191800 bp
Length : 1317 bp
Strand : +
Note : TIGRFAM: xylose isomerase; KEGG: xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel

DNA sequence :
ATGGAATACTTCAAAAATGTACCACAAATAAAATATGAAGGACCAAAATCAAACAATCCATATGCATTTAAATTTTACAA
TCCAGATGAAATAATAGACGGAAAACCTTTAAAAGAACACTTGCGTTTTTCAGTAGCGTACTGGCACACATTTACAGCTA
ATGGGACAGATCCATTTGGAGCACCTACAATGCAAAGGCCATGGGACCATTTTACTGACCCTATGGATATTGCCAAAGCG
AGAGTAGAAGCAGCCTTTGAACTATTTGAAAAACTCGACGTACCATTTTTCTGTTTCCATGACAGAGATATAGCTCCGGA
AGGAGAGACATTAAGGGAGACGAACAAAAATTTAGATACAATAGTTGCAATGATAAAAGACTACTTAAAGACGAGCAAAA
CAAAAGTATTATGGGGTACAGCGAACCTTTTTTCAAATCCGAGATTTGTACATGGAGCAGCTACTTCCTGTAATGCAGAT
GTATTTGCATATGCAGCAGCGCAAGTAAAAAAAGCCCTTGAGATAACAAAAGAACTTGGAGGACAGAACTATGTATTTTG
GGGTGGAAGAGAAGGATATGAAACATTACTTAACACAGATATGGAATTGGAACTTGATAACTTAGCAAGATTTTTGCACA
TGGCAGTAGAATATGCACAAGAGATAGGATTTGAAGGGCAGTTTTTAATTGAGCCAAAACCTAAAGAACCGACAAAACAC
CAATATGATTTTGATGCAGCAAGTGTACATGCATTTTTAAAGAAGTACGACCTTGATAAATACTTCAAATTAAACATAGA
AGCGAACCATGCGACACTTGCAGGACATGACTTTCAACATGAATTAAGATATGCAAGGATTAACAACATATTAGGCTCTA
TAGATGCAAATATGGGAGATATGCTTTTAGGATGGGATACAGACCAATATCCAACAGACATACGAATGACAACCCTTGCG
ATGTACGAAGTCATAAAGATGGGAGGTTTTAACAAAGGTGGACTTAACTTCGATGCGAAAGTAAGGCGTGCCTCCTTTGA
GCCAGAAGATTTATTTTTAGGGCATATAGCGGGTATGGATGCATTTGCAAAAGGATTCAAAGTAGCCTATAAGCTTGTTA
AAGATGGTGTATTTGATAGATTTATAGAAGAAAGATACAAAAGTTATCGAGAAGGCATAGGAGCAGAGATAGTAAGTGGG
AAAGCGAATTTTAAAACTCTTGAAGAATACGCATTAAACAATCCAAAAATTGAGAACAAATCAGGCAAGCAGGAACTACT
GGAGTCAATATTAAATCAGTATTTATTTAGTGAATGA

Protein sequence :
MEYFKNVPQIKYEGPKSNNPYAFKFYNPDEIIDGKPLKEHLRFSVAYWHTFTANGTDPFGAPTMQRPWDHFTDPMDIAKA
RVEAAFELFEKLDVPFFCFHDRDIAPEGETLRETNKNLDTIVAMIKDYLKTSKTKVLWGTANLFSNPRFVHGAATSCNAD
VFAYAAAQVKKALEITKELGGQNYVFWGGREGYETLLNTDMELELDNLARFLHMAVEYAQEIGFEGQFLIEPKPKEPTKH
QYDFDAASVHAFLKKYDLDKYFKLNIEANHATLAGHDFQHELRYARINNILGSIDANMGDMLLGWDTDQYPTDIRMTTLA
MYEVIKMGGFNKGGLNFDAKVRRASFEPEDLFLGHIAGMDAFAKGFKVAYKLVKDGVFDRFIEERYKSYREGIGAEIVSG
KANFKTLEEYALNNPKIENKSGKQELLESILNQYLFSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 8e-118 60
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 6e-118 60