Gene Information

Name : Thet_1399 (Thet_1399)
Accession : YP_003904290.1
Strain : Thermoanaerobacter sp. X513
Genome accession: NC_014538
Putative virulence/resistance : Virulence
Product : type II secretion system protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 1377079 - 1378755 bp
Length : 1677 bp
Strand : -
Note : KEGG: tpd:Teth39_1067 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase

DNA sequence :
ATGGCCAAGAAAAAGCTAGGGGAGCTTTTACTTGAGGTAGGGCTTATAACAGAAGAACAATTAAAGCACGCAATAGAAGT
TCAAAACAAAACAGGAGAAAAGTTAGGAAAAGTTCTTATTAAATTGGGGTATGTTACAGAAAGCCAAATACTAGAGGCTT
TAGAATTTCAATTAGGTATTCCACATGTAGATTTGCAAAAATACTATATTGATCCCGATGTAGCAAAATTAATTCCTGAA
GCCGTTGCTAAAAGACATACTATTATTCCTATAAAAAAAGATGAAGATGGTATATTGGTAGCAATGGCAGACCCTCTGAA
TATTTTTGCACTAGATGATGTGAGAATCATTACGAAACAAAATGTAAAGCCTTTAATTGCTTCTGAAGGAAGCATCTTAA
AAGCCATAGATAGAATTTACGGAAGAGAACAGGCAGAAAAAGCAGTACAGGATTTTAAAAAGGAGTTTCAAAGTGAAAGT
CAAGAAGAGCTGCCAGATGAGATTCTTGAAGAAGTACAAAACGCGCCTGCTGTACGCTTTGTAAATTCTATAATTGAGCA
GGCAATAAAAAATAGGGCTTCAGATATTCACATTGAACCTACTGAAAAAGACCTTAGAATTCGATTTAGGATAGATGGAC
AATTAACAGAAGCTATGAGGACTATAAAAAGTACCCATGCCCCTGTTGTGACAAGAGTAAAAATTATGGCTAATATGAAC
ATCGCTGAAAGAAGACTTCCTCAAGATGGCAGATTTGATTTTACTACAGGTGGTAAAAATATTGACATAAGAGTTTCTTC
GTTGCCCACTGTTTTTGGAGAGAAATTGGTATTGAGGCTTTTAGACAAGGAAAATTTTATAATGACAAAGGAGCAATTAG
GTTTTGAAGAAGAGGATCTGGTGCTCTTTGATAAACTTATCAAAAGGCCTAATGGCATTGTGCTTTTGACTGGTCCTACA
GGTAGTGGGAAAACCACCACTCTTTATGCAATGCTGAGAGAGCTTAACAAACCCAATATTAATATAATAACTGTTGAGGA
CCCTGTTGAGTATTCCCTTGAGGGAATAAACCAGGTACAAGTTAATGAAAAGGCAGGCCTTACCTTTGCGACTGCTCTTA
GGTCAATTTTGAGGCAAGACCCTGATATAATTATGATTGGAGAAATTAGAGATACTGAAACTGCTGAGATAGCTATTCGC
TCTGCCATAACAGGGCACTTAGTCCTTTCCACTTTGCATACAAATGATGCGGCGGGAGCGGTGACTAGGCTTGTAGATAT
GGGTATAGAGCCTTATCTTGTGTCTTCTTCTGTAGTAGGGGTTATTGCTCAGAGATTGGCGAGAAAAATATGTGATAACT
GTAGAATTTCTTATAAAGCTTCCAAAGGCGAAAAAGAGCTATTGGGAATTTCAGAAAATGAAGACATTACTTTATACAAG
GGGAGAGGGTGCCCTGTTTGTAATAAAACAGGCTATAGGGGAAGAATTCCTATATATGAGATAATGACTGTTACTTCTGA
TATTAGAGAGCTTATAAATGCTAAGGTTTCCTCTGATGTTATTGGAGCTCAGGCTGTAAAAAATGGCATGAAAACTTTAC
GAGAAAGTGCTAAAAGACTTGTATTACAAGGAAAAACTACAATTGATGAAATGATAAGACTAACTTACGAGGAATGA

Protein sequence :
MAKKKLGELLLEVGLITEEQLKHAIEVQNKTGEKLGKVLIKLGYVTESQILEALEFQLGIPHVDLQKYYIDPDVAKLIPE
AVAKRHTIIPIKKDEDGILVAMADPLNIFALDDVRIITKQNVKPLIASEGSILKAIDRIYGREQAEKAVQDFKKEFQSES
QEELPDEILEEVQNAPAVRFVNSIIEQAIKNRASDIHIEPTEKDLRIRFRIDGQLTEAMRTIKSTHAPVVTRVKIMANMN
IAERRLPQDGRFDFTTGGKNIDIRVSSLPTVFGEKLVLRLLDKENFIMTKEQLGFEEEDLVLFDKLIKRPNGIVLLTGPT
GSGKTTTLYAMLRELNKPNINIITVEDPVEYSLEGINQVQVNEKAGLTFATALRSILRQDPDIIMIGEIRDTETAEIAIR
SAITGHLVLSTLHTNDAAGAVTRLVDMGIEPYLVSSSVVGVIAQRLARKICDNCRISYKASKGEKELLGISENEDITLYK
GRGCPVCNKTGYRGRIPIYEIMTVTSDIRELINAKVSSDVIGAQAVKNGMKTLRESAKRLVLQGKTTIDEMIRLTYEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 3e-102 52
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-102 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thet_1399 YP_003904290.1 type II secretion system protein E VFG0182 Protein 5e-103 52
Thet_1399 YP_003904290.1 type II secretion system protein E VFG2048 Protein 7e-103 51
Thet_1399 YP_003904290.1 type II secretion system protein E VFG1876 Protein 2e-94 49
Thet_1399 YP_003904290.1 type II secretion system protein E VFG0233 Protein 5e-86 46
Thet_1399 YP_003904290.1 type II secretion system protein E VFG0112 Protein 1e-89 42
Thet_1399 YP_003904290.1 type II secretion system protein E VFG1880 Protein 2e-86 41