Gene Information

Name : Vdis_0573 (Vdis_0573)
Accession : YP_003901021.1
Strain : Vulcanisaeta distributa DSM 14429
Genome accession: NC_014537
Putative virulence/resistance : Unknown
Product : Vitamin B6 biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 551272 - 552297 bp
Length : 1026 bp
Strand : +
Note : COGs: COG0214 Pyridoxine biosynthesis enzyme; InterPro IPR011060:IPR001852:IPR013798; KEGG: pas:Pars_0228 pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protein; Indole-3-glycerol phosphate synthase; SPTR: A4WHH6 Pyridoxal biosynthesis l

DNA sequence :
ATGTCCGTAGCGCCCTCCTTCGAATACCTGGAGAAACTAAGGGACTTCTTCTACGGAATGCTGGAGCTCAGGGATAGGCT
TAGGGAGAGGGGCTTTAGTTGGCCTAGGCCTTATGAACTAGACGGGATAATCACCGGCACGGTGAAGGTTAAGGTCGGCT
TCCCATCAATGCTTAGGAATGGGGTCATAATGGATGTGACGAATGTGGAGCAGGCGCAAATAGCCGAGGAGGCAGGCGCC
GTGGGGGTCATGGTCCTGGATAAGTTGCCCTACGATGTGCGTAAGGCCGGTGGTGTGGCTAGGATGGCGGATGTTAAGGT
CATTGAGGACGTAATGAGGCACATAACAATACCCGTCTCTGCGAAGGTTAGGATTGGTCATTACTACGAGGCCTTCATAC
TCGAGCAAATAGGCATTGATTTGATAGATGAGTCCGAGGTATTGACGCCGGTTGATGAGCAGCACCACATAAATAAGTGG
TTGTTCTCGGTACCCTTCGTTAATGGATGCCGAGAGTTATGCGAGGCGCTTAGGAGGATTAGTGAGGGTGCATCAATGAT
AAGGTCTAAGGGTGAGGCGGGCACGGGCAACGTCAGTGAGGCTGTCAAGCACTTCAAGGTTCTTTATAAGGCGATTAATG
AGTTGTACGCGGCATATGGGGATGGCGACGAGGAGAAATTGAGGGACTTCGCCAGGCAGTGCCAGGTGCCAATTGAGTTG
GTGACCTTGACGGCTAGGCTGGGCAGATTGCCGGTGATAACCTTCGCCGCCGGCGGTATAGCCACGCCAGCCGACGCGGC
CTTAATGATGTGGCTCGGGGCTGATGGAATCTTCGTCGGCTCAGGGATCTTCAAGAGCCAGGACCCGAGGGAGAGGGCTG
AGGCTATCGTGATCGCCACAGCCCATTGGGATGACCCTGAGGTCGTCGTTGAGGCCCAGAGGATGGTTAGCGAGAAGGCA
TCCATGATGGGCATAGACATTAGGTCATTGAAGCCGGAGGAGTTACTCCAGGTCAGGGGTGTCTAG

Protein sequence :
MSVAPSFEYLEKLRDFFYGMLELRDRLRERGFSWPRPYELDGIITGTVKVKVGFPSMLRNGVIMDVTNVEQAQIAEEAGA
VGVMVLDKLPYDVRKAGGVARMADVKVIEDVMRHITIPVSAKVRIGHYYEAFILEQIGIDLIDESEVLTPVDEQHHINKW
LFSVPFVNGCRELCEALRRISEGASMIRSKGEAGTGNVSEAVKHFKVLYKAINELYAAYGDGDEEKLRDFARQCQVPIEL
VTLTARLGRLPVITFAAGGIATPADAALMMWLGADGIFVGSGIFKSQDPRERAEAIVIATAHWDDPEVVVEAQRMVSEKA
SMMGIDIRSLKPEELLQVRGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 9e-60 55
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 7e-60 55
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-59 55