Gene Information

Name : Vdis_0400 (Vdis_0400)
Accession : YP_003900852.1
Strain : Vulcanisaeta distributa DSM 14429
Genome accession: NC_014537
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 388167 - 388889 bp
Length : 723 bp
Strand : -
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: cma:Cmaq_0772 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8MCV1 ABC transporter related; PF

DNA sequence : 
GTGTCGTTCATTGAGGCTAGGGACGTGTGGAAGTACTACGGTGATTACCCAGCACTCCGTGGTGTGAACCTGGAGATTAA
TGAGGGTGAGTTTAGATGTATAGTTGGGCCTAGTGGTAGTGGTAAGACGACCCTACTCAGCCTAATAGGTGGTTTAGACA
GGGTTAGTAGGGGTTACCTTAGGGTTGGGCCTTACGAATTGCATAGGCTTGGTAATGCGGAGCTTGATAGGTATAGGAAT
GAGTTCGTGGGCTTCGTATTCCAACTATACTACTTAATACCTAGGATGACCGTGCTCGAGAACGTCGAGTTACCGTTAAT
AGCCAGGGGCGTGGATCCAAGCCAAAGGAGGAGACTAGCCCTTGAGGCCCTTGAGATGGTTGGTCTTAGGGATAAGGCCA
GGAGGAGGCCTAATGAGCTTAGTGGCGGTGAGCAGCAGAGGGTGGCCATTGCCAGGGCGATAGTGGCCAGGCCAAGGCTC
CTACTGGCTGATGAACCCACTGGCAACCTTGATAGTAAGACCGCGGCCATAATCATGGAAATATTCAGGAAATTGAATAG
GGAGCTCGGCATGACCATAGTCATGGTAACACACAACCTCGAGTTAATAGGTAACTGCCACAAGGTCTCTAGGATAAGCG
ACGGCGTAATAACGAGGACCTACGAAGTCCCACAGGTACGTGAGAGCCTTGAGCAATTAATTAGGGAGTTAACTGCCATA
TAG

Protein sequence : 
MSFIEARDVWKYYGDYPALRGVNLEINEGEFRCIVGPSGSGKTTLLSLIGGLDRVSRGYLRVGPYELHRLGNAELDRYRN
EFVGFVFQLYYLIPRMTVLENVELPLIARGVDPSQRRRLALEALEMVGLRDKARRRPNELSGGEQQRVAIARAIVARPRL
LLADEPTGNLDSKTAAIIMEIFRKLNRELGMTIVMVTHNLELIGNCHKVSRISDGVITRTYEVPQVRESLEQLIRELTAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-24 46
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-11 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vdis_0400 YP_003900852.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-35 47
Vdis_0400 YP_003900852.1 ABC transporter-like protein NC_008702.1.4606598. Protein 5e-24 45
Vdis_0400 YP_003900852.1 ABC transporter-like protein CP001581.1.gene598.p Protein 9e-31 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Vdis_0400 YP_003900852.1 ABC transporter-like protein VFG0869 Protein 4e-14 41