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Name : HELO_1096 (HELO_1096) Accession : YP_003896164.1 Strain : Halomonas elongata DSM 2581 Genome accession: NC_014532 Putative virulence/resistance : Virulence Product : TRAP transporter large transmembrane protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 109553 - 110851 bp Length : 1299 bp Strand : + Note : TRAP transporter (tripartite ATP-independent periplasmic transporter), large transmembrane protein (permease, DctM-like protein). DNA sequence : ATGACACTGATCGACAGCGCCGTTCTGTTCGGCACGTTCTTCCTGCTTCTCGCGCTTGGCCTGCCCATCGTCTTCGCTAT CGGTATCGCCTCGCTCGTCTCGATCGCGACCAGCTTCGCCCTGCATGACGCCGCCCTCATTGTCTCCCAGCGGATGCTGA GCGGGCTCGACAGCTTCACCCTGCTGGCGATTGCTTTCTTCATTCTCGCGGGCGCGTTGATGAACCGCGGCGGCATCGCC ATTCGCCTGATAGACCTGGCGCGCTTGATCGTCGGGCGACTGCCCGGGAGTCTTGCCCACTGCAATGTGGTGGCGAACAT GCTGTTCGGCGCGATCTCCGGCTCCGCCGTTGCCTCGTGCGCGGCGGTAGGGAGCGTCATGACGCCGCTTCAGAGGAGCG AGGGCTACGATCCGGGTTACGCCGCCGCAGTCAACATCGCGTCGAGCCCGGCGGGACTGCTGATTCCACCGAGCTCGACT TTCATCGTCTACTCGCTCGTCTCCGGCGGCACTTCCATCGCCGCGCTCTTCCTTGCGGGCTACTTGCCGGGACTGATGAT GGGGCTCGGGCTCATGCTCGTTGCTGGGATCATCGCCAAGCGGCGGGGCTATAGCGCGGATGTGGCGGAGCGCCAGCCGA TCTTGCCCACGCTGCTCCACGCCCTGCCTTCGGTTCTGCTGATGGTGATCGTCATCGGCGGCATCGTTGCCGGTGTCTTC ACTGCCACGGAAGCCTCGGCGATCGCGGTGATCTATACCCTGATTCTCACCATGGCGATCTACCGCACAATCACTTTCAG GGCGCTCCCGGCGATCGTGCTGGAAGCGGCGATGACCACCGCCATCGTGCTGCCGCTCATCTCGGTTTCCGGCGCGATGT CGTGGGCGATGTCGCTGGAGAGCATCCCGCAACAGATTTCTGCAGCGCTGCTCTCGCTCTCCGATAATCCGCTGGTCATC CTCCTGCTGATCAACCTGATCCTGCTCGCGATCGGCATGTTCATGGACATCACGCCGGCACTGCTGATCTTCACGCCGAT CTTTCTGCCCATCGTCACGCAGTTCGGCATGGATCCGGTTCACTTCGGTGTGCTGATGGCGTTCAATCTCTGTATCGGCA TCTGTACCCCGCCAGTGGGTAGTGCGCTTTTTGTCGGCAGTTCCATCGCCGGCGTTTCCATCGGCAGAGTGGGGGTGCCA CTGTTGCCGATGTTCGTCGTGCTCTTTGCGATGCTGATGGCGATCACCTACCTGCCCCAGATCAGTCTCTTTCTTCCCAA TCTGCTGCTCGGCGATTGA Protein sequence : MTLIDSAVLFGTFFLLLALGLPIVFAIGIASLVSIATSFALHDAALIVSQRMLSGLDSFTLLAIAFFILAGALMNRGGIA IRLIDLARLIVGRLPGSLAHCNVVANMLFGAISGSAVASCAAVGSVMTPLQRSEGYDPGYAAAVNIASSPAGLLIPPSST FIVYSLVSGGTSIAALFLAGYLPGLMMGLGLMLVAGIIAKRRGYSADVAERQPILPTLLHALPSVLLMVIVIGGIVAGVF TATEASAIAVIYTLILTMAIYRTITFRALPAIVLEAAMTTAIVLPLISVSGAMSWAMSLESIPQQISAALLSLSDNPLVI LLLINLILLAIGMFMDITPALLIFTPIFLPIVTQFGMDPVHFGVLMAFNLCIGICTPPVGSALFVGSSIAGVSIGRVGVP LLPMFVVLFAMLMAITYLPQISLFLPNLLLGD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 2e-32 | 42 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 2e-32 | 42 |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 2e-32 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HELO_1096 | YP_003896164.1 | TRAP transporter large transmembrane protein | VFG1110 | Protein | 9e-33 | 42 |
