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Name : tex (HELO_1687) Accession : YP_003896756.1 Strain : Halomonas elongata DSM 2581 Genome accession: NC_014532 Putative virulence/resistance : Unknown Product : ribonuclease RNAse H Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 798178 - 800532 bp Length : 2355 bp Strand : + Note : protein yhgF - Escherichia coli (strain K12),InterPro: ribonuclease RNase H fold containing, High confidence in function and specificity DNA sequence : ATGGACGCACAAGCCAAGATCATCGATCGTCTCGCCGAGGAGCTCGGCGTTCGCGCGCCCCAGGTGGCGGCTACCGTGGA ACTGCTCGACGGCGGTGCCACCGTTCCCTTCATTGCCCGTTACCGCAAGGAAGCCACCGGCGGGCTGGACGATACCCAAC TGCGTTCCCTGGAAGAGCGGCTGGGTTATCTGCGCGAACTGGAAGAGCGCCGCGAGTCGGTACTGGCCAGCATCGACGAG CAAGGCAAGCTCACCGAGGCGCTGGCCGCGAGCATCCGTGCCGCCGATACCAAGCAGCGCCTGGAAGACCTCTATCTGCC GTATCGCAAGAAGCGTCGCACCAAGGCGCAGATCGCGCGCGAGGCGGGCCTGGAGCCGCTGGCCGATGCGTTGCTGGCCG ACCCGACCCTGTCGCCCGAGGAGCAGGCCGCCGGCTATCTGCGCGCGGCAGACGGCGATATTCCGGCCATCGAGGATGCC AAGTCGGCGCTGGACGGCGCCAAGCAGATTCTCATGGAGCGGTTCGCCGAGGAGCCCGAGCTGGTCGGCCAACTGCGCGA GCGCCTGTGGAACGAAGGCGTGCTCAGTGCCCGGCTGATCGACGGCAAGGAACGCGAGGGTGCCAAGTTCGCCGATTACT TCGAGCATGACGAGGCCATCGCCAAGGTGCCTTCGCACCGCGCTCTGGCGATGTTCCGCGGACGCAACGAGGGCGTGCTG TCGCTGGTCATCCGCCTGCCGGGCGAGGACGAGGCCGCCGTGCATCCGGCGCAGGTGGCCATCGCCAGGCACTTCGAGAT TCAGGACCAGGGGCGTGCCGCCGACCGTTGGCTCGCCGAAGTGGTGCGCTGGACCTGGCGGGTCAAGCTCTACACCCACC TCGAGACCGAGCTGATGGGCCGCCTGCGCGAACGCGCCGAAGCCGAGGCCATCGGTGTCTTCGCCGCCAATCTCAAGGAT TTGCTGCTGGCGGCGCCGGCCGGTGCCAAGGCGACGCTGGCCATTGATCCCGGGCTGCGTACCGGTTGCAAGGTGGCAGT GGTCAGCGCCACCGGCCAGTTCCTGGGCCAGTCGACCATCTTCCCCCATGCGCCGCGTCATCAGTGGAACGAGTCGCTGG CCGAGCTGGCCCGACTGGTGGAGGCTCATGATGTGGCCCTGATCGCCGTGGGCAACGGTACCGCCAGCCGCGAGACCGAC AAGCTGGCGGGCGAGCTGGTCAAGGCCATGGCCGGGACGCGTCGCCTCTCCAAGGTGATGGTCAGCGAGGCCGGCGCCTC GGTCTATTCGGCGTCGGAGTATGCCTCCCGCGAACTGCCGGATCTCGACGTGACCGTGCGCGGCGCGGTGTCGATCGCCC GCCGCCTGCAGGATCCGCTGGCCGAGCTGGTCAAGATCGAGCCCAAGTCCATCGGCGTCGGCCAGTACCAGCACGATGTC TCCCAGGTTCAGCTTTCGCGCAGCCTGGAGGCGGTGATCGAGGATTGCGTCAATGCCGTGGGCGTGGATCTCAATACCGC TTCCTCGGCCCTGCTGTCGCGGGTGGCCGGCCTCAATGCCGGCCTCGCCGAGAACATCGTCGCCCGCCGCGACGCCGAAG GCGCCTTCCGTTCGCGTCGCCAACTGCTGGATGTCAGCCGTCTCGGCCCCAAGACCTTCGAGCAGTGCGCCGGCTTTCTT CGCATCATGGATGGCGACAATCCGCTGGACGCCAGTGCGGTCCACCCCGAGGCCTACCCGCTGGTGGAGCGTATCGCCTC GCGCAGCGGTCGCGATCTGGCCGGGCTGATCGGTGACAGCACGACCCTCAAGTCGCTCAAGGCTGCCGAGTTCGCCGACG AGCGCTTCGGCGTGCCCACCGTCAACGATATCCTCAAGGAACTGGACAAGCCCGGCCGCGATCCGCGTCCCGAATTCCGG GCCGCCGAGTTCCGCGAAGGTGTGGAGACGCTCAAGGACCTGGAGCCCGGCATGGTGCTGGAAGGCAGCGTGACCAACGT CACCCACTTCGGTGCTTTCGTCGATATCGGCGTCCATCAGGACGGTCTGGTACATATCTCGGCGTTGTCCAACAAGTTCG TCGAGGATCCCCGTTCGGTGGTCAAGGCCGGTGACATCGTCAAGGTCAAGGTCATGAACGTGGACCTCGAACGCTCGCGT ATCGGACTCTCCATGCGTCTCGACGATCAGCCCGGCGAGGCCGAGGGCGATCGGCCTGGCAAGGGGGGCGAGTCGCGTGG GCGTGGCAAGGCACCCCGCAAGGGAGGCGGCAAGACGAAGGGGCAAGGTGGCCAGGGAGAGGGCCAGCTCGGCGCCCTGG GGGCAGCATTGCTCAAGGCCAAGCGTGATGGCTAG Protein sequence : MDAQAKIIDRLAEELGVRAPQVAATVELLDGGATVPFIARYRKEATGGLDDTQLRSLEERLGYLRELEERRESVLASIDE QGKLTEALAASIRAADTKQRLEDLYLPYRKKRRTKAQIAREAGLEPLADALLADPTLSPEEQAAGYLRAADGDIPAIEDA KSALDGAKQILMERFAEEPELVGQLRERLWNEGVLSARLIDGKEREGAKFADYFEHDEAIAKVPSHRALAMFRGRNEGVL SLVIRLPGEDEAAVHPAQVAIARHFEIQDQGRAADRWLAEVVRWTWRVKLYTHLETELMGRLRERAEAEAIGVFAANLKD LLLAAPAGAKATLAIDPGLRTGCKVAVVSATGQFLGQSTIFPHAPRHQWNESLAELARLVEAHDVALIAVGNGTASRETD KLAGELVKAMAGTRRLSKVMVSEAGASVYSASEYASRELPDLDVTVRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDV SQVQLSRSLEAVIEDCVNAVGVDLNTASSALLSRVAGLNAGLAENIVARRDAEGAFRSRRQLLDVSRLGPKTFEQCAGFL RIMDGDNPLDASAVHPEAYPLVERIASRSGRDLAGLIGDSTTLKSLKAAEFADERFGVPTVNDILKELDKPGRDPRPEFR AAEFREGVETLKDLEPGMVLEGSVTNVTHFGAFVDIGVHQDGLVHISALSNKFVEDPRSVVKAGDIVKVKVMNVDLERSR IGLSMRLDDQPGEAEGDRPGKGGESRGRGKAPRKGGGKTKGQGGQGEGQLGALGAALLKAKRDG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 62 |
