Gene Information

Name : HELO_1575 (HELO_1575)
Accession : YP_003896644.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Virulence
Product : response regulator OmpR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 662147 - 662809 bp
Length : 663 bp
Strand : +
Note : transcriptional regulator resD - Bacillus subtilis,InterPro: Response regulator receiver, High confidence in function and specificity

DNA sequence : 
ATGCGGGTGCTGCTTGTGGAAGACGATCCCTTGCTGGGCGATGGCATCAGGACTGCCCTGCAGCGGGAAGGATATGCCGT
CGACTGGCTGGAAACCGGCAGGGATGGCATTGCGGCAATCCGCCATGATGATTTTTCGGCGGTCATTCTGGATCTGGGCC
TGCCGGATATCGACGGCATGGAAGTGCTGGACAAGATTCGACATGCCGGCTCCTTGCCGGTACTGATACTGACGGCCCGC
GATGCGGTCGAGTCGCGCATTTCCGGCCTGGATGGTGGAGCCGATGACTATGTGCTCAAGCCCTTCGATCTTCAGGAGCT
GCTGGCGCGTCTCCGGGTCATCATGCGCCGTGCCGAGGGACGTTCATCTCGCCTGCTCGAGGTGGGCGAGCTATGTATCG
ACGAGGCTCGGCACCGTGTCTCCTGGCAGGGAAACGACATCTCGCTCACCCGTCGCGAGTATGCCCTGCTGCTGGAACTG
GCGCGTCATCCAGGCCGGGTGATGACCCGACCGCACCTGGAGGATCTGCTGTATGGCTGGGAGGATGAAGTGGCATCCAA
TGCCGTGGAAGTGCATGTCCATCACTTGCGCAAGAAGCTCGACAGGCATCTGATCGCCACGGTGCGCGGTGTCGGTTACC
GCCTGGATACCGCAAGCGAATGA

Protein sequence : 
MRVLLVEDDPLLGDGIRTALQREGYAVDWLETGRDGIAAIRHDDFSAVILDLGLPDIDGMEVLDKIRHAGSLPVLILTAR
DAVESRISGLDGGADDYVLKPFDLQELLARLRVIMRRAEGRSSRLLEVGELCIDEARHRVSWQGNDISLTRREYALLLEL
ARHPGRVMTRPHLEDLLYGWEDEVASNAVEVHVHHLRKKLDRHLIATVRGVGYRLDTASE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-37 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HELO_1575 YP_003896644.1 response regulator OmpR BAC0487 Protein 2e-31 44
HELO_1575 YP_003896644.1 response regulator OmpR BAC0197 Protein 2e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HELO_1575 YP_003896644.1 response regulator OmpR VFG0473 Protein 5e-39 46
HELO_1575 YP_003896644.1 response regulator OmpR VFG1390 Protein 7e-29 41