|
Name : arsB (HELO_1497) Accession : YP_003896565.1 Strain : Halomonas elongata DSM 2581 Genome accession: NC_014532 Putative virulence/resistance : Resistance Product : arsenic pump protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 570368 - 571678 bp Length : 1311 bp Strand : - Note : Arsenical pump membrane protein - Escherichia coli O157:H7,InterPro: Arsenical pump membrane protein, High confidence in function and specificity DNA sequence : ATGCTGGCTTTCGCCATCTTCGTGGCCACGCTGATGCTGGTCATCTGGCAGCCCAGGGGGCTGGGCATCGGCTGGAGCGC GCTGGGCGGCGCGGCGGTGGCACTGGCCACCGGCGTGGTCGACTGGGGCGATGTGGACACCGTCTGGCACATCGTCTGGG ATGCCACCTTCACCTTCGTCGCCCTGATCATCATCTCGCTGATCCTCGACGAAGCGGGCTTCTTCGCCTGGGCCGCCCTG CATATCGCCCGCTGGGGCAACGGCCGCGGTCGACTGCTGTTTCCACTGATCGTGATGCTCGGCGCGATGATCGCGGCGCT GTTCGCCAACGACGGCGCGGCCCTGCTGCTGACGCCCATCGTCATCGCCATCCTGGCACGGCTGGATTTTCGGCCGGGTG CCGCCCTGGCCTTCATCATCGCCACCGGCTTCGTCGCCGACTCCACGAGCCTGCCGCTGATCATCTCCAACCTGGTCAAC ATCGTCAGCGCCAACTACTTCGACATCGGCTTCACGCGCTACACCCAGGTCATGGTGCCGGTCGACCTGGTCTCGCTGAT CGCCACCCTCGTCGTGCTGGGCTGGTACTTCCGCCGCGAGATCCCCGGGCAGTACGACGTCGAACGCCTGGAAGCTCCGG CCAGCGCCATCCGCGACCATCACGTCTTTCGCGCCGCCTTCCCGCTGCTGCTCGTGCTGCTGGCCGCGCTCTTCCTGACC ACCCGCTGGGAAGTGCCCTTCGCGATCATCATGGGCAGCGCCGCCCTCATCCTGATGGCCATCGCCGGACGCTGGTTCAC CGCCGGGCACGTGCATGTCATCTCGCTCAAACGCGTGATTCGCAATGCCCCCTGGCAGATCGTGCTGTTCTCGCTGGGCA TGTACCTGGTGGTCTATGGCCTGGGCAATGCCTGGCTGACCGCCCGAGCGGCGGATGTGCTGGTGTGGCTGAGCCAGCAA GGCACGATCGTGGCGACCGTCGGCACCGGCTTCGCCTCCGCCATCCTGGCCTCGCTGATGAACAACATGCCCTCCACGCT GATCGGCGCGCTGGCCATCGACCAGGCGGATGTCGCACAGCAGACTCAGCAGTTGATGGTCTACGCCAACGTCATCGGCA ACGACCTGGGCCCCAAGTTCACGCCCATCGGCAGCCTCGCCACGCTGCTCTGGCTGCATGTGCTCGCCGGCAAGGGCTAC CGCATCGGCTGGGGGCAGTACATGAAAGTCGGGCTGGTCATCACCCCGCCGGTGCTGCTGGCCACCCTGCTCGCCCTGGC ACTGTGGCTGCCCGTGTTGCCGGCCCCCTAG Protein sequence : MLAFAIFVATLMLVIWQPRGLGIGWSALGGAAVALATGVVDWGDVDTVWHIVWDATFTFVALIIISLILDEAGFFAWAAL HIARWGNGRGRLLFPLIVMLGAMIAALFANDGAALLLTPIVIAILARLDFRPGAALAFIIATGFVADSTSLPLIISNLVN IVSANYFDIGFTRYTQVMVPVDLVSLIATLVVLGWYFRREIPGQYDVERLEAPASAIRDHHVFRAAFPLLLVLLAALFLT TRWEVPFAIIMGSAALILMAIAGRWFTAGHVHVISLKRVIRNAPWQIVLFSLGMYLVVYGLGNAWLTARAADVLVWLSQQ GTIVATVGTGFASAILASLMNNMPSTLIGALAIDQADVAQQTQQLMVYANVIGNDLGPKFTPIGSLATLLWLHVLAGKGY RIGWGQYMKVGLVITPPVLLATLLALALWLPVLPAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 1e-94 | 58 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 2e-82 | 55 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 8e-84 | 54 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 6e-80 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| arsB | YP_003896565.1 | arsenic pump protein | BAC0576 | Protein | 2e-94 | 59 |
| arsB | YP_003896565.1 | arsenic pump protein | BAC0578 | Protein | 2e-94 | 59 |
| arsB | YP_003896565.1 | arsenic pump protein | BAC0031 | Protein | 1e-95 | 58 |
| arsB | YP_003896565.1 | arsenic pump protein | BAC0577 | Protein | 2e-93 | 58 |
| arsB | YP_003896565.1 | arsenic pump protein | BAC0574 | Protein | 4e-81 | 54 |
| arsB | YP_003896565.1 | arsenic pump protein | BAC0575 | Protein | 2e-83 | 53 |
