Gene Information

Name : HELO_1356 (HELO_1356)
Accession : YP_003896424.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Unknown
Product : short chain dehydrogenase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : 1.-.-.-
Position : 414234 - 414974 bp
Length : 741 bp
Strand : -
Note : 3-oxoacyl-[acyl-carrier-protein] reductase -Thermotoga maritima,InterPro: Short-chain dehydrogenase/reductase SDR, Specificity unclear

DNA sequence :
ATGTCGAAAGTGATGCTGATTACCGGTGCCGGACGCGGCATCGGCGCCGCCACCGCTCGCCTCGCTGCCCAGCGCAGCTA
TGCAGTGGCCGTCAACTATCGCAGTGACGAGGCCGCGGCCGCCAGCGTGGTCGCCGACATCGAAGCCGCAGGCGGGCGTG
CCATCGCCATACGGGCCGATGTCGCCGTCGAGGCCGATATCCTTGCCATGTTCGAGACCGTGGACCGGGAGCTGGGCCGC
CTCGACGTGCTGGTCAACAACGCCGGCGTGGTCGACCAGGTCTGCCGCGTCGAGGACATGGACGCCGAGCGCATCGATCG
CATGATGCGCATCAACGTGACCGGCCCGTTCATCTGCGCCCGCGAGGCCATCAAGCGCATGGCCAAGCGTCACGGCGGCC
AGGGCGGCGCCATCGTCAATGTCGGCTCGGCGGCGTCTCACCTGGGCGGTGCCGACGAATACGTCGACTACGCCGCCTCG
AAGGGCGCCATCGATACCATGACCGAAGGACTGTCCAAGGAAGTCGCCGGTGACGGCATTCGTGTCAACACCGTACGTCC
CGGCGTGGTTCGCACCACCATCCACGCCAGTGGCGGCAACCCGGAAAAAACCGACGTTGCCGGTTCGGTCATCCCCATGG
GACGCATCGGCGAACCCGAGGAAATCGCCGAGGGCGTGCTGTGGCTCGCCGAAGCCGGCTTCACCACCGGCGCCCTGGTC
GATATAGACGGCGGGGTTTAA

Protein sequence :
MSKVMLITGAGRGIGAATARLAAQRSYAVAVNYRSDEAAAASVVADIEAAGGRAIAIRADVAVEADILAMFETVDRELGR
LDVLVNNAGVVDQVCRVEDMDAERIDRMMRINVTGPFICAREAIKRMAKRHGGQGGAIVNVGSAASHLGGADEYVDYAAS
KGAIDTMTEGLSKEVAGDGIRVNTVRPGVVRTTIHASGGNPEKTDVAGSVIPMGRIGEPEEIAEGVLWLAEAGFTTGALV
DIDGGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 2e-46 58
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 3e-42 52