Gene Information

Name : fliP (HELO_4368)
Accession : YP_003899437.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : 3.1.1.3
Position : 3943526 - 3944347 bp
Length : 822 bp
Strand : +
Note : flagellar biosynthetic protein fliP - Buchnera aphidicola subsp. Acyrthosiphon pisum (Acyrthosiphon pisum symbiotic bacterium),InterPro: flagellar transporter FliP, High confidence in function and specificity

DNA sequence : 
ATGACCAGCCTGCCGCTTCGCCCCTGGCGCTTTCCGCGCCCGCTGCCCCGACCCTCGTCGGCGCCGATCCTGCGGGCATC
GTTCTTGCTGAGCTTGCTCTTGCTGACATTGCTCTTGCTGGCGCTGCCCTCCCTGGCCGAGGCCCAGCAGATTCCCGGCA
TCATCAGCGAGCCCATGGAGGACGGCGGCCAGAAGTGGTCGCTGTCGCTGCAGACCCTGCTGCTGCTCAGCTCGATGGCC
TTCCTGCCGGCGGCCCTGCTGATGATGACCAGCTTCACCCGCATCATCATCGTGCTGAGCCTGCTGCGCACCGCCATGGG
CACCCAGGCCACGCCGCCCAATCAGGTCCTGCTGGGGCTGGCGCTGTTTCTGACCTTCTTCATCATGGCGCCGGTCTTCG
GCGAGGTACACGCCCAGGCCTGGGTCCCGCTGTCCAATGGCGACATCAACTTTCCCGAGTTCCTGCGCCAGGCCCAGGGC
CCGCTGCGGGAATTCATGATGGCCCAGACCCGGGAACCCGACCTGGCGCTGTTCGCCCGCCTGGCCGACATCGGCGAGCT
GCAGGGCCCGGCGGACGTTCCCATGCGTATCCTGGTGCCCTCCTTCGTGACCAGCGAGCTGAAGACGGCCTTCCAGATCG
GCTTCACCATCTTCATCCCCTTTCTGATCATCGACCTGGTGGTGGCCAGCACCCTGATGTCGCTGGGCATGATGATGGTG
CCGCCGATCACCATCTCGTTGCCGTTCAAGCTGATGCTGTTCGTGCTGGTCGATGGCTGGCAGTTGCTGATCGGCTCGCT
GGCGGAAAGCTTCTATCTGTGA

Protein sequence : 
MTSLPLRPWRFPRPLPRPSSAPILRASFLLSLLLLTLLLLALPSLAEAQQIPGIISEPMEDGGQKWSLSLQTLLLLSSMA
FLPAALLMMTSFTRIIIVLSLLRTAMGTQATPPNQVLLGLALFLTFFIMAPVFGEVHAQAWVPLSNGDINFPEFLRQAQG
PLREFMMAQTREPDLALFARLADIGELQGPADVPMRILVPSFVTSELKTAFQIGFTIFIPFLIIDLVVASTLMSLGMMMV
PPITISLPFKLMLFVLVDGWQLLIGSLAESFYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 3e-26 44
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 6e-27 43
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 6e-27 43
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 6e-27 43
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 3e-19 42
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 3e-19 42
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 1e-20 41
hrcR AAG33884.1 HrcR Virulence Hrp PAI Protein 1e-20 41
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 2e-20 41
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 2e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_003899437.1 flagellar biosynthesis protein FliP VFG2338 Protein 1e-66 70
fliP YP_003899437.1 flagellar biosynthesis protein FliP VFG0188 Protein 1e-30 42
fliP YP_003899437.1 flagellar biosynthesis protein FliP VFG0044 Protein 5e-29 42
fliP YP_003899437.1 flagellar biosynthesis protein FliP VFG0394 Protein 2e-29 41