Gene Information

Name : drrA (HELO_4321)
Accession : YP_003899390.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3890759 - 3891523 bp
Length : 765 bp
Strand : -
Note : alkaline phosphatase synthesis transcriptional regulator phoP - Bacillus subtilis,InterPro: Response regulator receiver, High confidence in function and specificity

DNA sequence : 
GTGTCCTGTATCAGAGACGACGAGGATGGTGCCATGACCTATCGAATCCTGTGTGTCGAGGACAATCCCGAGATCGGGCG
GATGCTCGTCGAGCGCCTGGCCGATGAGGGGCATCATTGCGACCGCGTGAGCGACGGCGAGTCGGCCCTGATCGCGCTGG
AGGGTGGGGCGTCTGTGGCGGGGTATGACCTGGTGATGCTGGATCTCATGCTGCCCGGCCTAGATGGCCTGGAGGTATGT
CGGCGATTGCGTCGCCAAGACAGCCGCACGCCGGTGCTGATGGTGACCGCCAAGGCGGCGATCCGCGACGTGGTGCTGGG
GCTCGAGATTGGCGCCGACGACTATGTCACCAAGCCTTTCCACATGTCGATCCTGCTGGCTCGGGTCCAGGCCCTGCTGA
GGCGCCATCGACATCCGGACGCGGGCGACGATGGCATCGTCGAGACGCCGCCCATGGTCCATGGCGAATTGGTCATCGAT
AGCGATCGGCATCGCGTGACTCTGGCGGGGCATGCCCTGCAACTGACCGCCAAGGAGTTCGCCCTGCTGGCCCTGTTCGC
TCGTCATCCGGGGCACAGCTTCACCCGAGGCGAGTTGCTCGACCGGGTATGGGGCGAGGAATTCGATGGGTACGACCACA
CCGTGAACACCCATATCAATCGCCTGCGCAACAAGATCGAGACTGATCCGGCCCGCCCCCGATTCATCCAGACCGTGTGG
GGGATCGGCTATCGATTCGCCGACGAGGAGAGAGACCTATCGTGA

Protein sequence : 
MSCIRDDEDGAMTYRILCVEDNPEIGRMLVERLADEGHHCDRVSDGESALIALEGGASVAGYDLVMLDLMLPGLDGLEVC
RRLRRQDSRTPVLMVTAKAAIRDVVLGLEIGADDYVTKPFHMSILLARVQALLRRHRHPDAGDDGIVETPPMVHGELVID
SDRHRVTLAGHALQLTAKEFALLALFARHPGHSFTRGELLDRVWGEEFDGYDHTVNTHINRLRNKIETDPARPRFIQTVW
GIGYRFADEERDLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-37 46
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-37 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
drrA YP_003899390.1 transcriptional regulator NC_012469.1.7686381. Protein 1e-37 44
drrA YP_003899390.1 transcriptional regulator BAC0197 Protein 1e-26 43
drrA YP_003899390.1 transcriptional regulator AE000516.2.gene3505. Protein 6e-26 42
drrA YP_003899390.1 transcriptional regulator NC_012469.1.7685629. Protein 5e-29 42
drrA YP_003899390.1 transcriptional regulator AE016830.1.gene1681. Protein 3e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
drrA YP_003899390.1 transcriptional regulator VFG1563 Protein 8e-38 46
drrA YP_003899390.1 transcriptional regulator VFG1702 Protein 1e-37 44