Gene Information

Name : HELO_4290 (HELO_4290)
Accession : YP_003899359.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG2378
EC number : -
Position : 3857439 - 3858308 bp
Length : 870 bp
Strand : +
Note : Hypothetical protein

DNA sequence : 
ATGAATGCGCACACGCCCCTTGCCTGGGATACCCTGGCACGCTATCGGCTGATCGAGATTCTGTCACTGTGGGAAGGTCG
GGTAGCCGCCAGTCAGATTGGTGAGGCGTTCGGCGTCGGTCGTCAGCAGGCCCAGAAGGTGCTGCGGCGCTATCGGGATC
TGGCCCCGGAGAACCTGCATTACGACGAAACCCGCCATGGCTTTCTGCCCAGTCCCGACTTCCTGCCCCGCTTCACCCAA
GGGCGGGCCGATGAGTACCTGCACCTGTTGAATGCCCACGATACCCTGAACTCGCCTTTCGCTGGCCTCAGCATGGGCGC
GGCAAACACCGAGTCGCTGCCAATGCCGAACCGGTCGATATCCCCGCAAGTGGTACGGGAGGTGGTCAAGGCGGCTCGGG
AGAGGCGCCGGCTGGAAGTGACGTATGCCTCTTTCTCGAACCCGGAGGGCCAGGATCGCATTCTCGTGCCGCACACGTTG
GTATTCGCCGCCGGGCGCTGGCATGTGCGCGCCTATTGCGAGAAGCATCGCAACTATCGGGATTTCGTGTTGAGCCGCTT
TCGCGGCGTGCCGGAGGATGCAGGCCCCATGCTCGGCAGGCATGATGCCGAGCATGACGAACGCTGGCAGACCCGCGTGG
CGGTGCGCCTGATTCCCGATCGGCGTCTTCCACAGGCCGAACGAGATCTGCTGGCACTGGACTACGCCATGCACGACGGC
GAACTGGAACTGTACTGTCGCGGCCCTTTGGTGCGCTATGCCCTGCGCGAGCTGGGCGTCAACCCGCACCATGCGGAGGC
CAATCCCCGTGCCCAGCAGATCGAGATCGCCAACCGGGAGTCCCTGGCCGCCTGGATTCTCTGGTCCTGA

Protein sequence : 
MNAHTPLAWDTLARYRLIEILSLWEGRVAASQIGEAFGVGRQQAQKVLRRYRDLAPENLHYDETRHGFLPSPDFLPRFTQ
GRADEYLHLLNAHDTLNSPFAGLSMGAANTESLPMPNRSISPQVVREVVKAARERRRLEVTYASFSNPEGQDRILVPHTL
VFAAGRWHVRAYCEKHRNYRDFVLSRFRGVPEDAGPMLGRHDAEHDERWQTRVAVRLIPDRRLPQAERDLLALDYAMHDG
ELELYCRGPLVRYALRELGVNPHHAEANPRAQQIEIANRESLAAWILWS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1772 NP_231407.1 hypothetical protein Not tested VPI-2 Protein 4e-55 45
VC0395_A1370 YP_001217313.1 hypothetical protein Not tested VPI-2 Protein 4e-55 45
VPI2_0020 ACA01837.1 hypothetical protein Not tested VPI-2 Protein 8e-55 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HELO_4290 YP_003899359.1 hypothetical protein VFG1105 Protein 2e-55 45